Pre_GI Gene

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Host: NC_010498 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010498:1659328 Escherichia coli SMS-3-5, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
165932816619432616fimbrial usher family proteinQuickGO ontologyBLASTP
16619571662487531protein FimF-like proteinQuickGO ontologyBLASTP
16625001663147648protein FimG-like proteinQuickGO ontologyBLASTP
16629871663892906IS2 transposase orfBQuickGO ontologyBLASTP
16638501664260411IS2 transposase orfAQuickGO ontologyBLASTP
16643991665313915protein FimH-like proteinQuickGO ontologyBLASTP
166565216679312280molybdopterin oxidoreductase alpha subunitQuickGO ontologyBLASTP
16681791668376198hypothetical proteinBLASTP
16684511669212762AraC family transcriptional regulatorQuickGO ontologyBLASTP
166967616712951620sulfataseQuickGO ontologyBLASTP
167134716725041158radical SAM domain-containing proteinQuickGO ontologyBLASTP
167279516744801686inner membrane ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
167451816768902373TonB-dependent receptorQuickGO ontologyBLASTP
167694716797302784M16B family peptidaseQuickGO ontologyBLASTP
168009216814921401glutamate decarboxylase GadAQuickGO ontologyBLASTP