Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:1513000 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
151305015162923243tail length tape measure proteinQuickGO ontologyBLASTP
15162851516626342phage minor tail proteinQuickGO ontologyBLASTP
15166261517324699phage minor tail protein LQuickGO ontologyBLASTP
15173411517481141regulatory proteinQuickGO ontologyBLASTP
15176751517815141hypothetical proteinBLASTP
15181181518996879antirepressor proteinQuickGO ontologyBLASTP
15190501519787738tail assembly proteinQuickGO ontologyBLASTP
15197841519969186bacteriophage lambda tail assembly protein IQuickGO ontologyBLASTP
152009115224392349hypothetical proteinBLASTP
152303015264313402hypothetical proteinBLASTP
15268081526927120hypothetical proteinBLASTP
15269741527879906insertion element IS2 transposase InsDQuickGO ontologyBLASTP
15283841528512129transposaseQuickGO ontologyBLASTP
152907615304371362hypothetical proteinBLASTP
15308011531664864spermidineputrescine ABC transporter membrane proteinQuickGO ontologyBLASTP
153164815327841137putrescinespermidine ABC transporter ATPaseQuickGO ontologyBLASTP
153299215342601269peptidase TQuickGO ontologyBLASTP
153430915354301122cupin family proteinQuickGO ontologyBLASTP
15355101535674165hypothetical proteinBLASTP
153567915369081230site-specific recombinase phage integrase familyQuickGO ontologyBLASTP
15375191538463945hypothetical proteinBLASTP
15384561538668213hypothetical proteinBLASTP
15391151539348234hypothetical proteinBLASTP