Pre_GI: BLASTP Hits

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Query: NC_011274:2044000:2077160 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 2077160, End: 2077378, Length: 219

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:947281:957204957204957422219Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage regulatory protein2e-34144
NC_011294:2053991:208603220860322086250219Salmonella enterica subsp. enterica serovar Enteritidis strphage regulatory protein2e-34144
NC_011205:2180598:221304722130472213265219Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-34144
NC_011149:1987291:201618320161832016401219Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-34144
NC_011741:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein6e-2095.9
CU928160:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein6e-2095.9
NC_016832:948029:957798957798958013216Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-2095.9
NC_002655:3538656:356603035660303566236207Escherichia coli O157:H7 EDL933, complete genomeputative DNA binding protein2e-1994.7
NC_002695:3468873:349874034987403498946207Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA binding protein2e-1994.7
NC_013008:3525428:355770135577013557907207Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA binding protein2e-1994.7
NC_013941:3300000:333647233364723336720249Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA binding protein4e-1993.2
NC_011094:2791719:281336128133612813570210Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-1993.2
NC_013716:2139952:216269121626912162930240Citrobacter rodentium ICC168, complete genomehypothetical protein6e-1992.8
NC_008253:1938975:196845019684501968668219Escherichia coli 536, complete genomeputative regulatory protein3e-1890.5
NC_010067:191190:199577199577199783207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1890.1
NC_011283:4438500:445473644547364454942207Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family4e-1890.1
NC_011745:2209288:226533522653352265553219Escherichia coli ED1a chromosome, complete genomeputative DNA binding protein from phage origin8e-1889
NC_011745:3245000:326245132624513262654204Escherichia coli ED1a chromosome, complete genomeputative regulatory protein from prophage (AlpA family)3e-1787.4
NC_009436:3117661:314615831461583146364207Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA2e-1684.3
NC_008800:1090000:109849810984981098698201Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-1683.6
NC_011094:638552:652744652744652941198Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-1580.1
NC_013892:3278647:328257832825783282784207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage7e-1579.3
NC_013892:1272448:129876412987641298970207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage1e-1478.6
NC_012917:1840172:185006018500601850278219Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA3e-1477.4
NC_013421:1819036:184891018489101849116207Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA3e-1477
NC_014500:3744705:376114837611483761351204Dickeya dadantii 3937 chromosome, complete genomeputative regulatory protein1e-1375.5
NC_010694:2716348:273867627386762738873198Erwinia tasmaniensis, complete genomePutative hypothetical protein (prophage CP4-57 regulatory protein)2e-1270.9
NC_012912:4194821:419819641981964198399204Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA8e-1268.9
NC_013592:4295449:430099243009924301195204Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA8e-1268.9
NC_014500:443874:459413459413459616204Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein8e-1268.9
NC_012880:4117376:412043941204394120642204Dickeya dadantii Ech703, complete genomephage transcriptional regulator, AlpA8e-1268.9
NC_020211:996497:100966210096621009928267Serratia marcescens WW4, complete genomehypothetical protein2e-0961.2
NC_012731:600518:627192627192627392201Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-0960.1
NC_009648:5119271:514087751408775141077201Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein4e-0960.1
NC_014972:247028:265810265810266025216Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage transcriptional regulator, AlpA8e-0959.3
NC_009792:3225965:324232932423293242529201Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-0858.5
NC_015731:1578106:159965415996541599836183Nitrosomonas sp. Is79A3 chromosome, complete genomephage transcriptional regulator AlpA1e-0858.5
NC_008150:650899:655055655055655255201Yersinia pestis Antiqua, complete genometranscriptional regulator1e-0858.5
NC_005810:1130251:114441011444101144610201Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator1e-0858.5
NC_010159:1417993:142247114224711422671201Yersinia pestis Angola, complete genometranscriptional regulator, AlpA family1e-0858.5
NC_008149:3251196:326535532653553265555201Yersinia pestis Nepal516, complete genometranscriptional regulator1e-0858.5
NC_009381:2939782:295394029539402954140201Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator1e-0858.5
NC_017168:4155143:416033541603354160535201Yersinia pestis A1122 chromosome, complete genomeAlpA family transcriptional regulator1e-0858.5
NC_017265:1136000:113964911396491139849201Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,DNA-binding protein1e-0858.5
NC_009778:567000:596545596545596727183Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-0856.6
NC_010498:4072681:408781140878114088077267Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator6e-0856.2
NC_010468:1130000:115080511508051151071267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA6e-0856.2
NC_007613:4217557:422168542216854221951267Shigella boydii Sb227, complete genomehypothetical protein6e-0856.2
NC_011740:448000:452630452630452896267Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein of bacteriophage origin, putative COG3311, putative DNA binding6e-0856.2
NC_013361:4959323:495991949599194960185267Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA binding transcriptional regulator6e-0856.2
NC_015422:2806832:282494928249492825182234Alicycliphilus denitrificans K601 chromosome, complete genomephage transcriptional regulator AlpA6e-0856.2
NC_005085:659378:678312678312678530219Chromobacterium violaceum ATCC 12472, complete genomeprobable prophage regulatory protein5e-0856.2
NC_010468:49074:496614966149927267Escherichia coli ATCC 8739, complete genomephage transcriptional regulator, AlpA7e-0855.8
NC_012691:2614603:262271626227162622955240Tolumonas auensis DSM 9187, complete genomephage transcriptional regulator, AlpA1e-0755.5
NC_002505:1931750:193580119358011936007207Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator2e-0754.7
NC_009457:1444449:148890414889041489110207Vibrio cholerae O395 chromosome 2, complete sequencetranscriptional regulator2e-0754.7
NC_012578:1838470:188293418829341883140207Vibrio cholerae M66-2 chromosome I, complete sequencetranscriptional regulator2e-0754.7
NC_012582:2013515:202032320203232020529207Vibrio cholerae O395 chromosome chromosome I, complete sequencetranscriptional regulator2e-0754.7
NC_012668:1688500:171150017115001711706207Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator2e-0754.7
NC_016944:1978058:198210919821091982315207Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator2e-0754.7
NC_009439:1297851:130657513065751306763189Pseudomonas mendocina ymp, complete genomephage transcriptional regulator, AlpA2e-0754.7
NC_016445:1363831:140720214072021407378177Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional regulator2e-0754.7
NC_017270:1755552:177452717745271774703177Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator2e-0754.7
NC_012668:1688500:169464616946461694876231Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-0754.3
NC_012560:1677798:168635916863591686646288Azotobacter vinelandii DJ, complete genomeProphage CP4-57 regulatory, AlpA-like protein2e-0754.3
NC_021150:1677811:168637216863721686659288Azotobacter vinelandii CA6, complete genomeProphage CP4-57 regulatory, AlpA-like protein2e-0754.3
NC_005139:2201820:227257322725732272794222Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator2e-0754.3
NC_017270:1755552:178876517887651788965201Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator, AlpA like protein2e-0754.3
NC_014306:4901390:494030849403084940574267Erwinia billingiae Eb661, complete genomePhage transcriptional regulator, AlpA-family3e-0753.9
NC_008321:1993541:201135520113552011549195Shewanella sp. MR-4, complete genomephage transcriptional regulator, AlpA4e-0753.5
NC_013421:1819036:184166718416671841861195Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA4e-0753.5
NC_012912:1701231:171525317152531715447195Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA4e-0753.5
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA6e-0752.8
NC_014500:3097362:314293231429323143126195Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein7e-0752.8
NC_009901:1516340:153082715308271531030204Shewanella pealeana ATCC 700345, complete genomephage transcriptional regulator, AlpA1e-0652.4
NC_008344:49039:121606121606121818213Nitrosomonas eutropha C91, complete genomephage transcriptional regulator, AlpA9e-0752.4
NC_017506:1100679:111453411145341114761228Marinobacter adhaerens HP15 chromosome, complete genomeprophage CP4-57 regulatory9e-0752.4
NC_015061:1251905:127032612703261270544219Rahnella sp. Y9602 chromosome, complete genomephage transcriptional regulator, AlpA1e-0652
NC_012917:833721:838409838409838669261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA1e-0652
NC_007722:2993852:299950229995022999717216Erythrobacter litoralis HTCC2594, complete genomehypothetical protein1e-0652
NC_013456:2984491:299468929946892994889201Vibrio sp. Ex25 chromosome 1, complete genomephage transcriptional regulator AlpA1e-0652
NC_004547:1873390:188101818810181881212195Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative prophage regulatory protein2e-0651.6
NC_009092:1441813:145459814545981454783186Shewanella loihica PV-4, complete genomephage transcriptional regulator, AlpA1e-0651.6
NC_006351:520500:526300526300526518219Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding protein1e-0651.6
NC_007650:2429307:245447724544772454695219Burkholderia thailandensis E264 chromosome II, complete sequenceprophage regulatory protein AlpA family protein1e-0651.6
NC_010170:1324758:135213513521351352347213Bordetella petrii, complete genomeputative transcriptional regulator (phage-related)2e-0651.2
NC_011283:1811000:185314418531441853353210Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family2e-0651.2
NC_002505:514732:530402530402530602201Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator2e-0651.2
NC_012668:83641:897378973789937201Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator2e-0651.2
NC_016944:514742:530410530410530610201Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator2e-0651.2
NC_013508:3593000:360746636074663607687222Edwardsiella tarda EIB202, complete genomehypothetical protein2e-0651.2
NC_010634:1916000:191718019171801917365186Yersinia pseudotuberculosis PB1/+, complete genomephage transcriptional regulator, AlpA2e-0651.2
NC_009381:1362471:139729913972991397484186Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator2e-0651.2
NC_012731:3411161:342822134282213428406186Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulator2e-0651.2
NC_013592:2968500:299374929937492993943195Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA2e-0651.2
NC_017047:2079368:208454920845492084743195Rahnella aquatilis HX2 chromosome, complete genomeputative prophage regulatory protein3e-0650.8
NC_007404:2743877:275254427525442752756213Thiobacillus denitrificans ATCC 25259, complete genomePossible Transcriptional Regulator3e-0650.8
NC_016818:1795576:183513518351351835329195Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator3e-0650.8
NC_005139:796546:813042813042813236195Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator2e-0650.8
NC_004578:3849835:386503638650363865278243Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA-binding protein, putative4e-0650.4
NC_003143:2137945:213871521387152138996282Yersinia pestis CO92, complete genomeputative transcriptional regulator4e-0650.4
NC_008150:1420825:142179414217941422075282Yersinia pestis Antiqua, complete genomehypothetical protein4e-0650.4
NC_005810:1794490:179545917954591795740282Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator4e-0650.4
NC_009138:1974935:198388419838841984096213Herminiimonas arsenicoxydans, complete genomeputative CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage5e-0650.1
NC_007086:2477040:248606124860612486282222Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-0650.1
NC_010688:2781624:279949727994972799718222Xanthomonas campestris pv. campestris, complete genomephage-related regulatory protein4e-0650.1
NC_012917:3684840:368998636899863690246261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA4e-0650.1
NC_015224:3291736:331240633124063312600195Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phage transcriptional regulator, AlpA5e-0649.7
NC_008782:1510000:151461215146121514824213Acidovorax sp. JS42, complete genomephage transcriptional regulator, AlpA5e-0649.7
NC_015379:908904:935089935089935310222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, AlpA family7e-0649.3
NC_018691:3525430:356425235642523564566315Alcanivorax dieselolei B5 chromosome, complete genomePhage transcriptional regulator, AlpA8e-0649.3
NC_014923:3968000:397587739758773976080204Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeProphage CP4-57 regulatory1e-0548.9