Pre_GI: BLASTP Hits

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Query: NC_011205:1391971:1391971 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1391971, End: 1392708, Length: 738

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:1342474:1342474134247413458363363Salmonella enterica subsp. enterica serovar Choleraesuis strGifsy-1 prophage VhsJ3e-138490
NC_016860:2716152:2732841273284127362033363Salmonella enterica subsp. enterica serovar Typhimurium strhost specificity protein9e-138489
NC_017046:2717810:2734499273449927378613363Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein6e-137486
NC_016863:2721826:2737167273716727405293363Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1host specificity protein-J-like protein6e-137486
NC_016857:2719779:2735120273512027384823363Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74host specificity protein6e-137486
NC_016856:2773995:2788962278896227923243363Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shost specificity protein-J-like protein6e-137486
NC_016810:2719779:2735120273512027384823363Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein6e-137486
NC_011080:2722492:2737465273746527408273363Salmonella enterica subsp. enterica serovar Newport str. SL254,host specificity protein6e-137486
NC_003197:2720726:2737516273751627407943279Salmonella typhimurium LT2, complete genomehost specificity protein-J-like2e-107388
NC_008563:1505405:1505405150540515088033399Escherichia coli APEC O1, complete genomeputative tail component of prophage1e-41169
NC_013941:338121:3388533388533422663414Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage-related protein, tail component6e-41167
NC_011601:756885:7618197618197652323414Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehost specificity protein1e-40166
NC_013353:867869:8685718685718719663396Escherichia coli O103:H2 str. 12009, complete genomehost specificity protein3e-40165
AP010958:867869:8685718685718719663396Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative host specificity protein3e-40165
NC_013008:918215:9236729236729270853414Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component of prophage CP-933K2e-39162
NC_011353:921500:9220799220799254923414Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-39162
NC_002695:917509:9187149187149221273414Escherichia coli O157:H7 str. Sakai, complete genomeputative host specificity protein2e-39162
NC_002655:919654:9203629203629237783417Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933K2e-39162
AP010958:604719:6047196047196081173399Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative host specificity protein6e-39160
NC_013353:604719:6047196047196081173399Escherichia coli O103:H2 str. 12009, complete genomehost specificity protein6e-39160
NC_013361:649518:6502116502116536243414Escherichia coli O26:H11 str. 11368 chromosome, complete genomehost specificity protein1e-38159
NC_013941:1963523:1969589196958919726243036Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHost specificity protein2e-38159
NC_013941:1014386:1015744101574410191573414Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHost specificity protein J2e-38159
NC_004431:3012668:3027710302771030311893480Escherichia coli CFT073, complete genomePutative tail component of prophage9e-38157
NC_012967:1593101:1606613160661316079321320Escherichia coli B str. REL606 chromosome, complete genomeputative tail component of prophage8e-38157
NC_012967:531000:5518415518415546572817Escherichia coli B str. REL606 chromosome, complete genomeputative tail component of prophage8e-38157
AP010958:2134556:2147838214783821513173480Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative host specificity protein6e-38157
NC_013353:2134556:2147838214783821513173480Escherichia coli O103:H2 str. 12009, complete genomehost specificity protein6e-38157
NC_013941:733286:7332867332867366993414Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHost specificity protein J5e-38157
NC_008563:2041345:2054544205454420580263483Escherichia coli APEC O1, complete genomeputative tail component of prophage2e-37155
NC_011353:1716037:1716856171685617197112856Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein7e-37154
NC_013008:1715831:1715831171583117186862856Escherichia coli O157:H7 str. TW14359 chromosome, complete genometail component of cryptic prophage CP-933P7e-37154
NC_011751:1446073:1446073144607314495553483Escherichia coli UMN026 chromosome, complete genomeHost specificity protein J of prophage5e-37154
NC_011751:680417:6811486811486846453498Escherichia coli UMN026 chromosome, complete genomeHost specificity protein J of prophage1e-36153
NC_011601:1466496:1466496146649614699693474Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehost specificity protein9e-37153
NC_002695:1794635:1794635179463517981113477Escherichia coli O157:H7 str. Sakai, complete genomeputative host specificity protein8e-37153
NC_013364:1997891:2014345201434520178183474Escherichia coli O111:H- str. 11128, complete genomeputative host specificity protein8e-37153
NC_011353:2892265:2894581289458128980543474Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein8e-37153
NC_013008:2889743:2894875289487528983483474Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehost specificity protein J8e-37153
NC_011415:644811:6448116448116483083498Escherichia coli SE11 chromosome, complete genomeputative phage host specificity protein5e-36151
NC_002655:1909139:1921846192184619253223477Escherichia coli O157:H7 EDL933, complete genomeputative tail component of prophage CP-933O8e-36150
NC_013008:1761165:1773175177317517766513477Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehost specificity protein J1e-35149
NC_011353:1761977:1774199177419917776753477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-35149
NC_013361:1896446:1909356190935619128323477Escherichia coli O26:H11 str. 11368 chromosome, complete genomehost specificity protein1e-35149
NC_013364:863209:8762518762518797273477Escherichia coli O111:H- str. 11128, complete genomeputative host specificity protein2e-35149
NC_009800:1657550:1662058166205816647032646Escherichia coli HS, complete genomefibronectin type III domain protein7e-35147
NC_011745:2025725:2030659203065920342343576Escherichia coli ED1a chromosome, complete genomeHost specificity protein J (tail component) from phage origin2e-34145
NC_011745:1055354:1068370106837010719453576Escherichia coli ED1a chromosome, complete genomeHost specificity protein J from prophage4e-33141
NC_013353:1472506:1483138148313814865453408Escherichia coli O103:H2 str. 12009, complete genomehost specificity protein5e-30131
AP010958:1472506:1483138148313814865453408Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative host specificity protein5e-30131
NC_013941:1613595:1613595161359516170713477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehost specificity protein5e-30131
NC_013364:3312379:3319743331974333232193477Escherichia coli O111:H- str. 11128, complete genomeputative host specificity protein6e-30130
NC_013364:2522888:2539826253982625433023477Escherichia coli O111:H- str. 11128, complete genomeputative host specificity protein6e-30130
NC_013364:1477248:1478165147816514816443480Escherichia coli O111:H- str. 11128, complete genomeputative host specificity protein2e-29129
NC_002695:2158314:2163056216305621665353480Escherichia coli O157:H7 str. Sakai, complete genomeputative host specificity protein2e-29129
NC_011353:2563056:2580617258061725840963480Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein2e-29129
NC_002655:2730659:2748365274836527518443480Escherichia coli O157:H7 EDL933, complete genomeputative tail fiber component J of prophage CP-933U2e-29129
NC_013361:3597812:3616693361669336201663474Escherichia coli O26:H11 str. 11368 chromosome, complete genomehost specificity protein6e-29127
NC_013353:1305712:1306631130663113101043474Escherichia coli O103:H2 str. 12009, complete genomehost specificity protein4e-28125
AP010958:1305712:1306631130663113101043474Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative host specificity protein4e-28125
NC_013941:2425233:2442654244265424461303477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehost specificity protein6e-28124
NC_011353:1195179:1208230120823012117033474Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-27123
NC_013353:2272919:2289069228906922925453477Escherichia coli O103:H2 str. 12009, complete genomehost specificity protein1e-27123
AP010958:2272919:2289069228906922925453477Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative host specificity protein1e-27123
NC_013361:2169948:2174759217475921782353477Escherichia coli O26:H11 str. 11368 chromosome, complete genomehost specificity protein3e-27122
NC_013361:1593543:1603601160360116070773477Escherichia coli O26:H11 str. 11368 chromosome, complete genomehost specificity protein4e-27121
NC_013364:4990365:4990365499036549938413477Escherichia coli O111:H- str. 11128, complete genomeputative host specificity protein5e-27121
NC_011742:585908:5974935974936011853693Escherichia coli S88 chromosome, complete genomeHost specificity protein J1e-26120
NC_011750:1931384:1936675193667519404753801Escherichia coli IAI39 chromosome, complete genomeHost specificity protein J1e-26120
NC_011751:1377457:1388977138897713926693693Escherichia coli UMN026 chromosome, complete genomeHost specificity protein J1e-26120
NC_011750:919953:9286379286379323293693Escherichia coli IAI39 chromosome, complete genomeHost specificity protein J4e-26118
NC_004431:1352906:1364484136448413681763693Escherichia coli CFT073, complete genomePutative tail component of prophage4e-26118
NC_016514:2476359:2491529249152924939732445Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-1273.6
NC_013508:2587913:2601250260125026043453096Edwardsiella tarda EIB202, complete genomephage-related protein, tail component4e-0858.5