Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:1195179 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11968571197063207gpWQuickGO ontologyBLASTP
119706011986521593phage portal protein lambda familyQuickGO ontologyBLASTP
119864212001471506head-tail preconnector protein GP5QuickGO ontologyBLASTP
12001841200531348bacteriophage lambda head decoration protein DQuickGO ontologyBLASTP
12005891200855267major head proteinQuickGO ontologyBLASTP
12009151201577663major tail protein VQuickGO ontologyBLASTP
12015911202022432phage minor tail protein GQuickGO ontologyBLASTP
12020731202462390phage tail assembly protein TQuickGO ontologyBLASTP
120244312050222580prophage tail length tape measure proteinQuickGO ontologyBLASTP
12050191205348330phage minor tail proteinQuickGO ontologyBLASTP
12053481206046699phage minor tail protein LQuickGO ontologyBLASTP
12061651206800636tail assembly proteinQuickGO ontologyBLASTP
12067971207378582bacteriophage lambda tail assembly protein IQuickGO ontologyBLASTP
12075691208228660superoxide dismutaseQuickGO ontologyBLASTP
120823012117033474hypothetical proteinBLASTP
12117711212370600AilLom family proteinQuickGO ontologyBLASTP
121239212137471356tail fiber proteinQuickGO ontologyBLASTP
12137491214018270prophage tail fiber C-terminus family proteinQuickGO ontologyBLASTP
1215778121586790tRNA-SerQuickGO ontologyBLASTP
121629212174101119nickel-dependent hydrogenase 1 small subunitQuickGO ontologyBLASTP
121740712192001794hydrogenase 1 large subunitQuickGO ontologyBLASTP