Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:733286 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
7332867366993414Host specificity protein JQuickGO ontologyBLASTP
736769737368600hypothetical proteinBLASTP
7374277402612835PPE-repeat proteinQuickGO ontologyBLASTP
740261740845585Tail fiber assembly proteinQuickGO ontologyBLASTP
740900741568669hypothetical proteinBLASTP
741625741930306tail fiber assembly proteinQuickGO ontologyBLASTP
7421147435981485protease encoded within prophage CP-933XQuickGO ontologyBLASTP
743785744738954protease VIIQuickGO ontologyBLASTP
745237745821585Helix-turn-helix domain proteinQuickGO ontologyBLASTP
745846746283438hypothetical proteinBLASTP
746726747487762envelope protein thermoregulation of porin biosynthesisQuickGO ontologyBLASTP
747670748560891hypothetical proteinBLASTP
7485617515332973bacteriophage N4 adsorption protein AQuickGO ontologyBLASTP
7515207537572238bacteriophage N4 adsorption protein BQuickGO ontologyBLASTP
7540237551591137ISEc4 transposaseQuickGO ontologyBLASTP
755374755595222hypothetical protein
7556227569561335hypothetical proteinBLASTP