Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:1963523 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
196352319647311209transposase-like proteinQuickGO ontologyBLASTP
19648811965531651hypothetical proteinBLASTP
19655161965863348hypothetical protein
19658051965957153hypothetical proteinBLASTP
19662421966817576hypothetical proteinBLASTP
196720119685141314tail fiber protein encoded by prophage CP-933RQuickGO ontologyBLASTP
19685791969178600enterobacterial AilLom family proteinQuickGO ontologyBLASTP
19692451969553309Host specificity protein JQuickGO ontologyBLASTP
196958919726243036Host specificity proteinQuickGO ontologyBLASTP
19732541974072819tail fiber component K of prophageQuickGO ontologyBLASTP
19740021974700699minor tail proteinQuickGO ontologyBLASTP
19747001975029330minor tail family proteinQuickGO ontologyBLASTP
197502619776052580tail component of prophage CP-933OQuickGO ontologyBLASTP
19775861977999414hypothetical proteinBLASTP
19780261978457432phage minor tail protein GQuickGO ontologyBLASTP
19784711979223753bacterial surface protein containing Ig-like domainsQuickGO ontologyBLASTP
19792311979626396hypothetical proteinBLASTP
19796231980156534hypothetical proteinBLASTP
19801711980524354hypothetical proteinBLASTP
19805171980900384hypothetical proteinBLASTP
198095219819801029phage major capsid protein EQuickGO ontologyBLASTP
19820381982385348bacteriophage lambda head decoration protein DQuickGO ontologyBLASTP
198242219839271506periplasmic serine proteases ClpP classQuickGO ontologyBLASTP
198391719855091593bacteriophage capsid proteinQuickGO ontologyBLASTP
19855061985712207head completion proteinQuickGO ontologyBLASTP
198569619876601965terminase large subunit of prophage CP-933OQuickGO ontologyBLASTP
19875961988105510prophage Qin DNA packaging protein NU1-like proteinQuickGO ontologyBLASTP