Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:2563056 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
25626052563075471very short patch repair proteinQuickGO ontologyBLASTP
256305625644741419DNA cytosine methylaseQuickGO ontologyBLASTP
25645412565236696hypothetical proteinBLASTP
25676022567724123hypothetical proteinBLASTP
25678212567964144hypothetical proteinBLASTP
25679852568836852chaperone protein HchAQuickGO ontologyBLASTP
256894425703021359heavy metal sensor histidine kinaseQuickGO ontologyBLASTP
25703022571003702transcriptional regulatory protein YedWQuickGO ontologyBLASTP
25711062571519414transthyretin family proteinQuickGO ontologyBLASTP
257162725726311005sulfite oxidase subunit YedYQuickGO ontologyBLASTP
25726322573267636sulfite oxidase subunit YedZQuickGO ontologyBLASTP
25735242574174651hypothetical proteinBLASTP
25745172575047531nickel-dependent hydrogenase b-type cytochrome subunitQuickGO ontologyBLASTP
25761842576837654non-LEE-encoded effector EspJQuickGO ontologyBLASTP
25771462577310165hypothetical protein
25774652578175711tir-cytoskeleton coupling proteinQuickGO ontologyBLASTP
25783012578570270prophage tail fiber C-terminus family proteinQuickGO ontologyBLASTP
257857225798911320tail fiber proteinQuickGO ontologyBLASTP
25791982579662465hypothetical proteinBLASTP
25798212579949129hypothetical proteinBLASTP
25799502580549600AilLom family proteinQuickGO ontologyBLASTP
258061725840963480hypothetical proteinBLASTP
25841722584291120hypothetical proteinBLASTP
25843372584915579bacteriophage lambda tail assembly protein IQuickGO ontologyBLASTP
25849122585547636tail assembly proteinQuickGO ontologyBLASTP