Pre_GI Gene

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Host: NC_013941 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013941:1014386 Escherichia coli O55:H7 str. CB9615 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The E. coli O55:H7 strain CB9615 was isolated from an infant with diarrhea in Germany in 2003 and confirmed to belong to the same sequence type (ST11) as the O157:H7 clone by multilocus sequence typing. The O55:H7 and O157:H7 E. coli clones have been shown to be closely related. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10136911014389699minor tail proteinQuickGO ontologyBLASTP
10143861015138753tail fiber component K of prophageQuickGO ontologyBLASTP
10150361015683648tail component of prophage CP-933KQuickGO ontologyBLASTP
101574410191573414Host specificity protein JQuickGO ontologyBLASTP
10192271019826600enterobacterial AilLom family proteinQuickGO ontologyBLASTP
101988510212041320hypothetical proteinBLASTP
10211671021475309prophage tail fiber family proteinQuickGO ontologyBLASTP
10216521022632981NleBQuickGO ontologyBLASTP
10226931023685993Non-LEE encoded type III effector CQuickGO ontologyBLASTP
1024296102434348hypothetical protein
10245121025393882non-LEE-encoded type III effector HQuickGO ontologyBLASTP
10254281025562135hypothetical proteinBLASTP
10256241026322699hypothetical proteinBLASTP
10268291027305477hypothetical proteinBLASTP
102736410286531290adenosylmethionine-8-amino-7-oxononanoate transaminaseQuickGO ontologyBLASTP
102874010297801041biotin synthaseQuickGO ontologyBLASTP
1029777103093111558-amino-7-oxononanoate synthaseQuickGO ontologyBLASTP
10309181031673756biotin biosynthesis protein BioCQuickGO ontologyBLASTP
10316661032343678Dethiobiotin synthaseQuickGO ontologyBLASTP
103292210349432022UvrABC system protein BQuickGO ontologyBLASTP