Pre_GI Gene

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Host: NC_013361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013361:2169948 Escherichia coli O26:H11 str. 11368 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O26:H11 str. 11368 is a human enterohemorrhagic E. coli which attaches to and effaces cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
21699482170211264C-terminus fragment integraseQuickGO ontologyBLASTP
21704252170631207DNA damage-inducible proteinQuickGO ontologyBLASTP
21710022171988987T3SS effector NleCQuickGO ontologyBLASTP
21724182172687270hypothetical proteinBLASTP
217268921740021314side tail fiber proteinQuickGO ontologyBLASTP
21740672174690624outer membrane precursor LomQuickGO ontologyBLASTP
217475921782353477host specificity proteinQuickGO ontologyBLASTP
21784812179161681tail assembly proteinQuickGO ontologyBLASTP
21790592179802744tail assembly proteinQuickGO ontologyBLASTP
21798132180511699minor tail proteinQuickGO ontologyBLASTP
21805112180840330minor tail proteinQuickGO ontologyBLASTP
218083721834492613tail length tape measure proteinQuickGO ontologyBLASTP
21834302183819390minor tail proteinQuickGO ontologyBLASTP
21838702184292423minor tail proteinQuickGO ontologyBLASTP
21843062185058753major tail proteinQuickGO ontologyBLASTP
21854572185990534minor tail proteinQuickGO ontologyBLASTP
21860052186358354head-tail adaptorQuickGO ontologyBLASTP
21863702186765396DNA packaging proteinQuickGO ontologyBLASTP
218680721878321026major capsid proteinQuickGO ontologyBLASTP
21878882188226339head-DNA stabilization proteinQuickGO ontologyBLASTP
218823021895491320capsid proteinprohead proteaseQuickGO ontologyBLASTP
218953021911311602portal proteinQuickGO ontologyBLASTP
21911282191334207head-tail joining proteinQuickGO ontologyBLASTP
219133121932561926terminase large subunitQuickGO ontologyBLASTP
21932312193737507terminase small subunitQuickGO ontologyBLASTP