Pre_GI Gene

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Host: NC_013353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013353:604719 Escherichia coli O103:H2 str. 12009, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
6047196081173399host specificity proteinQuickGO ontologyBLASTP
608184608783600outer membrane precursor LomQuickGO ontologyBLASTP
6088486117632916side tail fiber proteinQuickGO ontologyBLASTP
611775612338564tail fiber assembly proteinQuickGO ontologyBLASTP
612436613026591site-specific recombinaseQuickGO ontologyBLASTP
613345613611267DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
614126614794669methylaseQuickGO ontologyBLASTP
614851615156306hypothetical proteinBLASTP
6153406168241485hydrolaseQuickGO ontologyBLASTP
617011617964954outer membrane protease OmpT precursorQuickGO ontologyBLASTP
618477619238762DNA-binding transcriptional activator EnvY of porin biosynthesisQuickGO ontologyBLASTP
619421620311891hypothetical proteinBLASTP
6203126232842973bacteriophage N4 receptor outer membrane subunit NfrAQuickGO ontologyBLASTP
6232716255082238bacteriophage N4 receptor inner membrane subunit NfrBQuickGO ontologyBLASTP
6257776269131137H repeat-associated proteinQuickGO ontologyBLASTP