Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:1761977 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
175985717619802124phage terminase large subunitQuickGO ontologyBLASTP
17619771762189213hypothetical proteinBLASTP
176218917636911503phage portal protein lambda familyQuickGO ontologyBLASTP
176370517656601956Clp protease domain-containing proteinQuickGO ontologyBLASTP
17657481766074327membrane proteinQuickGO ontologyBLASTP
17661001766348249hypothetical proteinBLASTP
17663511766974624prophage minor tail protein ZQuickGO ontologyBLASTP
17669871767385399phage minor tail protein UQuickGO ontologyBLASTP
17673931768145753major tail protein VQuickGO ontologyBLASTP
17681591768581423phage minor tail protein GQuickGO ontologyBLASTP
17686321768916285phage tail assembly protein TQuickGO ontologyBLASTP
176896017716052646prophage tail length tape measure proteinQuickGO ontologyBLASTP
17716021771931330phage minor tail proteinQuickGO ontologyBLASTP
17719311772629699phage minor tail protein LQuickGO ontologyBLASTP
17727481773383636tail assembly proteinQuickGO ontologyBLASTP
17733801773958579bacteriophage lambda tail assembly protein IQuickGO ontologyBLASTP
17740041774123120hypothetical proteinBLASTP
177419917776753477hypothetical proteinBLASTP
17777431778342600AilLom family proteinQuickGO ontologyBLASTP
17783431778471129hypothetical proteinBLASTP
17794421779720279tail fiber proteinQuickGO ontologyBLASTP
17797221779991270prophage tail fiber C-terminus family proteinQuickGO ontologyBLASTP
17804451780948504IS1 transposase orfBQuickGO ontologyBLASTP
17811241781714591OspGQuickGO ontologyBLASTP
17825761782692117hypothetical proteinBLASTP
17827521783258507hypothetical proteinBLASTP
17833041783825522YciF proteinQuickGO ontologyBLASTP
17838901784069180hypothetical proteinBLASTP