Pre_GI Gene

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Host: NC_013353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013353:2272919 Escherichia coli O103:H2 str. 12009, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
227332122743941074outer membrane porin proteinQuickGO ontologyBLASTP
22749872275838852Hsp31 molecular chaperoneQuickGO ontologyBLASTP
227594522773031359sensory kinase in two-component regulatory system with YedWQuickGO ontologyBLASTP
22773032277974672DNA-binding response regulator in two-component system with YedVQuickGO ontologyBLASTP
22781072278520414hypothetical proteinBLASTP
227862922796331005reductaseQuickGO ontologyBLASTP
22796342280269636hypothetical proteinBLASTP
22805262281176651hypothetical proteinBLASTP
22815192282049531cytochromeQuickGO ontologyBLASTP
22833942283963570T3SS effector NleFQuickGO ontologyBLASTP
22855712286551981T3SS effector NleBQuickGO ontologyBLASTP
22867282286997270hypothetical proteinBLASTP
228699922883121314side tail fiber proteinQuickGO ontologyBLASTP
22883772289000624outer membrane precursor LomQuickGO ontologyBLASTP
228906922925453477host specificity proteinQuickGO ontologyBLASTP
22926792293206528copperzinc-superoxide dismutaseQuickGO ontologyBLASTP
22933972294077681tail assembly proteinQuickGO ontologyBLASTP
22939752294718744tail assembly proteinQuickGO ontologyBLASTP
22947242295422699minor tail proteinQuickGO ontologyBLASTP
22954222295751330minor tail proteinQuickGO ontologyBLASTP
229574822983272580tail length tape measure proteinQuickGO ontologyBLASTP
22983082298697390minor tail proteinQuickGO ontologyBLASTP