Pre_GI Gene

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Host: NC_011742 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011742:585908 Escherichia coli S88 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
5842965859181623Portal protein head protein Gp4QuickGO ontologyBLASTP
5859085874131506head-tail preconnector protein GP5QuickGO ontologyBLASTP
587450587797348head decoration protein head protein GPshpQuickGO ontologyBLASTP
5878555888831029Major head protein head protein gp7QuickGO ontologyBLASTP
588887589309423hypothetical proteinBLASTP
589266589655390Tail attachment protein head protein gp8QuickGO ontologyBLASTP
589601590245645Minor tail protein Z GpZQuickGO ontologyBLASTP
590242590637396Minor tail protein UQuickGO ontologyBLASTP
590615591385771Major tail protein VQuickGO ontologyBLASTP
591401591823423Minor tail protein GQuickGO ontologyBLASTP
591805592239435Minor tail protein TQuickGO ontologyBLASTP
5922325947932562Minor tail protein precursor HQuickGO ontologyBLASTP
594790595119330Minor tail protein MQuickGO ontologyBLASTP
595119595817699Minor tail protein LQuickGO ontologyBLASTP
5955675965711005tail fiber component KQuickGO ontologyBLASTP
596469597149681Tail assembly protein IQuickGO ontologyBLASTP
5974936011853693Host specificity protein JQuickGO ontologyBLASTP
601253601852600Lom-like outer membrane protein of prophageQuickGO ontologyBLASTP
6020046040642061hypothetical proteinBLASTP
604061604339279hypothetical proteinBLASTP
604349604642294hypothetical proteinBLASTP
604835605419585AdoMet-dependent methyltransferase DLP12 prophageQuickGO ontologyBLASTP
6060496075331485exported protein proteaseQuickGO ontologyBLASTP