Pre_GI Gene

Some Help

Host: NC_013361 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013361:1593543 Escherichia coli O26:H11 str. 11368 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O26:H11 str. 11368 is a human enterohemorrhagic E. coli which attaches to and effaces cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
159218215935461365portal proteinQuickGO ontologyBLASTP
159354315947661224portal proteinQuickGO ontology
15947631595089327DNA packaging proteinQuickGO ontology
15951001595450351head-tail adaptorQuickGO ontologyBLASTP
15954471595893447minor tail proteinQuickGO ontologyBLASTP
15958901596234345minor tail proteinQuickGO ontologyBLASTP
15963001597016717major tail proteinQuickGO ontologyBLASTP
15970221597396375minor tail proteinQuickGO ontologyBLASTP
15974201597701282minor tail proteinQuickGO ontologyBLASTP
159774916009913243tail length tape measure proteinQuickGO ontologyBLASTP
16009841601325342minor tail proteinQuickGO ontologyBLASTP
16013251602023699minor tail proteinQuickGO ontologyBLASTP
16020341602777744tail assembly proteinQuickGO ontologyBLASTP
16026751603355681tail assembly proteinQuickGO ontologyBLASTP
160360116070773477host specificity proteinQuickGO ontologyBLASTP
16071461607769624outer membrane protein LomQuickGO ontologyBLASTP
160783516091571323side tail fiber proteinQuickGO ontologyBLASTP
16091591609428270hypothetical proteinBLASTP
16095421610117576T3SS effector NleINleGQuickGO ontologyBLASTP
16104081610989582T3SS effector NleGQuickGO ontologyBLASTP
16110571611692636T3SS effector NleGQuickGO ontologyBLASTP
161182016128781059T3SS effector EspWQuickGO ontologyBLASTP