Pre_GI Gene

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Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:1715831 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
171583117186862856tail component of cryptic prophage CP-933PQuickGO ontologyBLASTP
17187541719353600Lom-like outer membrane protein of cryptic prophage CP-933PQuickGO ontologyBLASTP
171950517208091305tail fiber protein of cryptic prophage CP-933PQuickGO ontologyBLASTP
17208111721080270hypothetical proteinBLASTP
17212371721767531hypothetical proteinBLASTP
172210717234321326non-LEE-encoded type III effectorQuickGO ontologyBLASTP
17240931724785693integraseQuickGO ontologyBLASTP
17252591726170912non-LEE-encoded type III effectorQuickGO ontologyBLASTP
17262361726805570non-LEE-encoded type III effectorQuickGO ontologyBLASTP
172777117293091539transposase ISEc8QuickGO ontologyBLASTP
17293591729706348transposaseQuickGO ontologyBLASTP
17297031730104402transposaseQuickGO ontologyBLASTP
17304231730701279non-LEE-encoded type III effectorQuickGO ontologyBLASTP
17314121732059648non-LEE-encoded type III effectorQuickGO ontologyBLASTP
17322431732833591non-LEE-encoded type III effectorQuickGO ontologyBLASTP
173629117374211131integrase for prophage CP-933OQuickGO ontologyBLASTP