Pre_GI Gene

Some Help

Host: NC_012967 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012967:1593101 Escherichia coli B str. REL606 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli B str. REL606 is unable to use arabinose due to a mutation. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
159310115951462046dipeptidyl carboxypeptidase IIQuickGO ontologyBLASTP
159528315960297473-hydroxy acid dehydrogenaseQuickGO ontologyBLASTP
15961181596804687putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
15969811597184204hypothetical proteinBLASTP
159722015986801461putative mannonate dehydrogenaseQuickGO ontologyBLASTP
159876916000521284putative transporterQuickGO ontologyBLASTP
16008051601071267putative DNA-binding transcriptional regulatorQuickGO ontologyBLASTP
16013871601977591putative site-specific recombinaseQuickGO ontologyBLASTP
16022051602498294hypothetical proteinBLASTP
16025091603213705hypothetical proteinBLASTP
16032231603504282hypothetical proteinBLASTP
160350416058822379putative tail fiber proteinQuickGO ontologyBLASTP
16059471606546600hypothetical proteinBLASTP
160661316079321320putative tail component of prophageQuickGO ontologyBLASTP
16079731608281309putative transposase-related proteinQuickGO ontologyBLASTP
16082781609144867putative transposase for IS3QuickGO ontologyBLASTP
16092981609504207hypothetical proteinBLASTP
16098001609973174hypothetical proteinBLASTP
16101461610301156hypothetical proteinBLASTP
16104491610703255putative cold-shock proteinQuickGO ontologyBLASTP
16106481610860213cold shock proteinQuickGO ontologyBLASTP
16112241611721498hypothetical proteinBLASTP
16117181612251534putative lysozymeQuickGO ontologyBLASTP
16125731613124552hypothetical proteinBLASTP