Pre_GI Gene

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Host: NC_011745 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011745:1055354 Escherichia coli ED1a chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated in the 2000s from the faeces of a healthy man in France. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
10551511055357207head stabilization proteinQuickGO ontologyBLASTP
105535410569461593head protein Gp4QuickGO ontologyBLASTP
105693610584411506head-tail preconnector protein GP5QuickGO ontologyBLASTP
10584781058825348major capsid protein DQuickGO ontologyBLASTP
105888310599111029major head proteinQuickGO ontologyBLASTP
10599641060332369putative DNA packaging protein from phage originQuickGO ontologyBLASTP
10603101060678369tail attachment proteinQuickGO ontologyBLASTP
10606941061227534minor tail protein Z GpZQuickGO ontologyBLASTP
10612241061619396minor tail protein UQuickGO ontologyBLASTP
10616271062373747major tail protein VQuickGO ontologyBLASTP
10623771062826450minor tail protein GQuickGO ontologyBLASTP
10628531063266414minor tail protein TQuickGO ontologyBLASTP
106324710658082562minor tail protein HQuickGO ontologyBLASTP
10658051066134330minor tail protein MQuickGO ontologyBLASTP
10660321066148117hypothetical proteinBLASTP
10661341066832699minor tail protein LQuickGO ontologyBLASTP
106658210675861005tail fiber component KQuickGO ontologyBLASTP
10674841068164681tail assembly protein IQuickGO ontologyBLASTP
106837010719453576Host specificity protein J from prophageQuickGO ontologyBLASTP
107213010736831554putative tail fiber protein from prophageQuickGO ontologyBLASTP
10737031074281579hypothetical proteinBLASTP
1074846107493388tRNA-SerQuickGO ontologyBLASTP
107536010764781119hydrogenase 1 small subunitQuickGO ontologyBLASTP
107647510782681794hydrogenase 1 large subunitQuickGO ontologyBLASTP
10782871078994708hydrogenase 1 b-type cytochrome subunitQuickGO ontologyBLASTP
10789911079578588hydrogenase 1 maturation proteaseQuickGO ontologyBLASTP
10795751079973399hydrogenase-1 operon protein HyaEQuickGO ontologyBLASTP
10799701080827858protein involved in nickel incorporation into hydrogenase-1 proteinsQuickGO ontologyBLASTP