Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:921500 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
921506922018513bacteriophage lambda tail assembly protein IQuickGO ontologyBLASTP
9220799254923414hypothetical proteinBLASTP
925563926162600AilLom family proteinQuickGO ontologyBLASTP
9262229275381317tail fiber proteinQuickGO ontologyBLASTP
927540927809270prophage tail fiber C-terminus family proteinQuickGO ontologyBLASTP
927986928966981non-LEE-encoded effector NleBQuickGO ontologyBLASTP
929027930019993non-LEE encoded type III effector CQuickGO ontologyBLASTP
930847931728882non-LEE-encoded effector NleHQuickGO ontologyBLASTP
933164933640477kinase inhibitor proteinQuickGO ontologyBLASTP
9336999350991401adenosylmethionine-8-amino-7-oxononanoate aminotransferaseQuickGO ontologyBLASTP
9350759361151041biotin synthaseQuickGO ontologyBLASTP
93611293726611558-amino-7-oxononanoate synthaseQuickGO ontologyBLASTP
937253938008756biotin biosynthesis protein BioCQuickGO ontologyBLASTP
938001938678678dithiobiotin synthetaseQuickGO ontologyBLASTP
9392579412782022excinuclease ABC subunit BQuickGO ontologyBLASTP
941469942377909hypothetical proteinBLASTP