Pre_GI Gene

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Host: NC_013364 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013364:4990365 Escherichia coli O111:H- str. 11128, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
499036549938413477putative host specificity proteinQuickGO ontologyBLASTP
49938744994533660putative outer membrane LomQuickGO ontologyBLASTP
499459849959111314putative side tail fiber proteinQuickGO ontologyBLASTP
49959134996182270hypothetical proteinBLASTP
499689549979531059T3SS secreted effector EspW-like proteinQuickGO ontologyBLASTP
49980324998682651T3SS secreted effector NleG-like proteinQuickGO ontologyBLASTP
49988654999455591T3SS secreted effector EspM-like proteinQuickGO ontologyBLASTP
49999575000205249putative DNA damage-inducible proteinQuickGO ontologyBLASTP
500145450024911038tRNA-dihydrouridine synthase AQuickGO ontologyBLASTP
50026255002867243phage shock protein GQuickGO ontologyBLASTP
50030335004016984quinone oxidoreductaseQuickGO ontologyBLASTP
500409950055141416replicative DNA helicase DnaBQuickGO ontologyBLASTP
500556750066461080alanine racemaseQuickGO ontologyBLASTP
500689950080921194tyrosine aminotransferase TyrB tyrosine-repressibleQuickGO ontologyBLASTP
50083145008817504hypothetical proteinBLASTP