Pre_GI Gene

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Host: NC_013364 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013364:3312379 Escherichia coli O111:H- str. 11128, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
331237933140401662recombination and repair protein RecNQuickGO ontologyBLASTP
33141893314530342small membrane lipoprotein SmpAQuickGO ontologyBLASTP
33145923314882291hypothetical proteinBLASTP
33148723315348477hypothetical proteinBLASTP
33154803315962483trans-translation protein SmpBQuickGO ontologyBLASTP
33168113317059249putative DNA damage-inducible proteinQuickGO ontologyBLASTP
33174273317696270hypothetical proteinBLASTP
331769833190111314putative side tail fiber proteinQuickGO ontologyBLASTP
33190763319675600putative outer membrane LomQuickGO ontologyBLASTP
331974333232193477putative host specificity proteinQuickGO ontologyBLASTP
33234663324146681putative tail assembly proteinQuickGO ontologyBLASTP
33240443324787744putative tail assembly proteinQuickGO ontologyBLASTP
33247933325491699putative minor tail proteinQuickGO ontologyBLASTP
33254913325820330putative minor tail proteinQuickGO ontologyBLASTP
332581733284622646putative tail length tape measure proteinQuickGO ontologyBLASTP
33285063328814309putative minor tail proteinQuickGO ontologyBLASTP
33288413329263423putative minor tail proteinQuickGO ontologyBLASTP
33292773330029753putative major tail proteinQuickGO ontologyBLASTP
33300373330198162putative minor tail proteinQuickGO ontologyBLASTP
33303823330708327putative IS629 transposase OrfAQuickGO ontologyBLASTP
33307053331595891putative IS629 transposase OrfBQuickGO ontologyBLASTP
33323433332948606hypothetical proteinBLASTP
33329453333139195hypothetical proteinBLASTP
33331323333566435putative late gene regulator QQuickGO ontologyBLASTP
33340733335020948Shiga toxin 1 subunit AQuickGO ontologyBLASTP
33350303335299270Shiga toxin 1 subunit BQuickGO ontology
33359443336081138hypothetical proteinBLASTP
33360833336550468putative endopeptidaseQuickGO ontologyBLASTP
33363183336488171putative lipoprotein Rz1QuickGO ontologyBLASTP