Pre_GI Gene

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Host: NC_011353 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011353:2892265 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
28922652892534270prophage tail fiber C-terminus family proteinQuickGO ontologyBLASTP
289253628938491314tail fiber proteinQuickGO ontologyBLASTP
28939142894513600AilLom family proteinQuickGO ontologyBLASTP
289458128980543474hypothetical proteinBLASTP
28981302898249120hypothetical proteinBLASTP
28982952898873579bacteriophage lambda tail assembly protein IQuickGO ontologyBLASTP
28988702899505636tail assembly proteinQuickGO ontologyBLASTP
28996242900322699phage minor tail protein LQuickGO ontologyBLASTP
29003222900651330phage minor tail proteinQuickGO ontologyBLASTP
290064829032932646prophage tail length tape measure proteinQuickGO ontologyBLASTP
29033372903645309phage tail assembly protein TQuickGO ontologyBLASTP
29041082904860753major tail protein VQuickGO ontologyBLASTP
29048682905266399phage minor tail protein UQuickGO ontologyBLASTP
29052792905902624prophage minor tail protein ZQuickGO ontologyBLASTP
29059052906153249hypothetical proteinBLASTP
29061792906505327membrane proteinQuickGO ontologyBLASTP
290659329100633471phage portal protein lambda familyQuickGO ontologyBLASTP
29100632910275213hypothetical proteinBLASTP
291027229123952124phage terminase large subunitQuickGO ontologyBLASTP
29123922912868477bacteriophage terminase small subunitQuickGO ontologyBLASTP