Pre_GI: BLASTP Hits

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Query: NC_008390:2643653:2653394 Burkholderia cepacia AMMD chromosome 1, complete sequence

Start: 2653394, End: 2655787, Length: 2394

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Isolated from the rhizosphere of healthy pea plants in Wisconsin, USA, in 1985. Pathogenic in cystic fibrosis patients. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009256:2725836:2727734272773427301272394Burkholderia vietnamiensis G4 chromosome 1, complete sequenceTOPRIM domain-containing protein01287
NC_014311:978761:9876869876869891701485Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein6e-96352
NC_010501:4787963:4794595479459547957821188Pseudomonas putida W619, complete genomehypothetical protein1e-77291
NC_017986:1862408:1873624187362418746461023Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-72275
NC_013722:1905655:1923594192359419253721779Xanthomonas albilineans, complete genomehypothetical protein1e-66255
NC_009074:94000:9434694346971982853Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein5e-55216
NC_003295:2669480:2689399268939926919452547Ralstonia solanacearum GMI1000, complete genomehypothetical protein2e-51204
NC_006351:520500:5228525228525257192868Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein2e-51204
NC_008542:2631138:2632749263274926356252877Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceinner membrane protein5e-51203
NC_008060:1945597:1947208194720819500842877Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceinner membrane protein5e-51203
NC_007650:2429307:2455275245527524581422868Burkholderia thailandensis E264 chromosome II, complete sequenceDNA primase7e-51202
NC_010508:2776283:2778117277811727809782862Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencePrimase 22e-50201
NC_007434:1322500:1346373134637313492342862Burkholderia pseudomallei 1710b chromosome I, complete sequenceinner membrane protein2e-50201
NC_009256:458649:4586494586494615252877Burkholderia vietnamiensis G4 chromosome 1, complete sequenceinner membrane protein3e-50200
NC_009076:106807:1102561102561131082853Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein8e-50199
NC_012724:3222415:3224293322429332271692877Burkholderia glumae BGR1 chromosome 1, complete genomeInner membrane protein4e-49196
NC_007434:3973145:4012459401245940140151557Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein1e-40168
NC_017249:908500:9152209152209167911572Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-33144
NC_015381:992401:1007868100786810106602793Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein3e-31137
NC_011001:372185:3915163915163933631848Burkholderia cenocepacia J2315 chromosome 2, complete sequencehypothetical protein7e-29129
NC_015856:3912195:3940210394021039427262517Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein8e-29129
NC_010515:1124298:1125386112538611272331848Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencePrimase 21e-28129
NC_014168:994640:1015301101530110168991599Segniliparus rotundus DSM 44985 chromosome, complete genomehypothetical protein4e-28127
NC_017218:273503:2881602881602903312172Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeDnaB-like helicase C-terminal domain protein1e-27125
NC_008061:2106848:2107936210793621097831848Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencehypothetical protein1e-27125
NC_014215:492855:5039985039985065202523Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,hypothetical protein9e-27122
NC_016026:2170500:218366521836652184543879Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein1e-25118
NC_015977:442493:450952450952451947996Roseburia hominis A2-183 chromosome, complete genomehypothetical protein2e-25117
NC_015977:3424178:3464864346486434667651902Roseburia hominis A2-183 chromosome, complete genomehypothetical protein4e-25117
NC_018750:4311300:4319819431981943209971179Streptomyces venezuelae ATCC 10712, complete genometoprim domain protein7e-25116
NC_004757:267165:267165267165268085921Nitrosomonas europaea ATCC 19718, complete genomeToprim domain1e-24115
NC_009254:365812:3763083763083781701863Burkholderia vietnamiensis G4 chromosome 3, complete sequenceDNA replication primase2e-23111
NC_014752:834616:871252871252871740489Neisseria lactamica ST-640, complete genomehypothetical protein1e-20102
NC_009434:1580205:159532015953201596195876Pseudomonas stutzeri A1501, complete genomeTOPRIM domain-containing protein5e-20100
NC_012751:942315:9547339547339572192487Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeDNA primase TraC4e-20100
NC_004578:3849835:3854392385439238566112220Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA primase domain protein1e-1999
NC_017986:5509569:5526345552634555285552211Pseudomonas putida ND6 chromosome, complete genomeTraC domain-containing protein1e-1998.6
NC_002947:3404000:3421840342184034240502211Pseudomonas putida KT2440, complete genomepyocin R2_PP, traC domain protein1e-1998.6
NC_012796:1600600:1627250162725016291331884Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1998.2
NC_014169:231210:2463532463532480531701Bifidobacterium longum subsp. longum JDM301 chromosome, completehypothetical protein3e-1997.8
NC_017033:2081206:210437521043752105307933Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein4e-1997.4
NC_016830:5031819:5038640503864050408592220Pseudomonas fluorescens F113 chromosome, complete genomevirulence-associated e family protein5e-1997.1
NC_004129:2201780:2215930221593022181672238Pseudomonas fluorescens Pf-5, complete genomeDNA primase domain protein1e-1895.5
NC_015593:2553500:2578299257829925800231725Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeBifunctional DNA primase/polymerase5e-1893.6
NC_014664:1614568:1614568161456816171172550Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomehypothetical protein3e-1790.9
NC_017506:2089769:209501420950142095910897Marinobacter adhaerens HP15 chromosome, complete genomevirulence-associated E family protein4e-1790.9
NC_016026:2082500:2092628209262820943341707Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeprimase family protein5e-1790.5
NC_012814:1357070:1365578136557813667801203Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein6e-1790.1
NC_012815:1357003:1365511136551113667131203Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein6e-1790.1
NC_011835:965977:9744859744859756871203Bifidobacterium animalis subsp. lactis AD011 chromosome, completeATP-dependent serine protease6e-1790.1
NC_017216:1356930:1365438136543813666401203Bifidobacterium animalis subsp. lactis BLC1, complete genomeAAA domain-containing protein6e-1790.1
NC_017217:1362573:1371081137108113722831203Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein6e-1790.1
NC_017215:1361822:1370384137038413716461263Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,hypothetical protein7e-1789.7
NC_017214:54558:6312063120643821263Bifidobacterium animalis subsp. lactis BB-12 chromosome, completezinc metalloprotease7e-1789.7
NC_004632:28470:4292242922475954674Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000B,DNA primase TraC2e-1688.2
NC_014972:480355:4964064964064988622457Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein3e-1687.4
NC_012522:4299287:4308017430801743100172001Rhodococcus opacus B4, complete genomehypothetical protein5e-1687
NC_008314:2686851:2692615269261526946212007Ralstonia eutropha H16 chromosome 2, complete sequenceputative helicase5e-1583.6
NC_015221:12389:3452534525374162892Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencehypothetical protein2e-1482
NC_006569:69939:8294082940847511812Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencehypothetical protein3e-1481.3
NC_012880:4117376:4117865411786541199102046Dickeya dadantii Ech703, complete genomeP4 alpha zinc-binding domain protein7e-1480.1
NC_012912:4194821:4195622419562241976672046Dickeya zeae Ech1591, complete genomeP4 alpha zinc-binding domain protein1e-1379.3
NC_013592:4295449:4298421429842143004662046Dickeya dadantii Ech586, complete genomeP4 alpha zinc-binding domain protein2e-1378.6
NC_014500:443874:4601454601454621902046Dickeya dadantii 3937 chromosome, complete genomeDNA primase4e-1377.4
NC_013892:1272448:1299079129907913018532775Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase5e-1377
NC_009436:3367194:3382164338216433844972334Enterobacter sp. 638, complete genomeplasmid and phage DNA primase7e-1376.6
NC_013722:218847:2332592332592357272469Xanthomonas albilineans, complete genomehypothetical protein1e-1275.9
NC_010468:1130000:1146686114668611490192334Escherichia coli ATCC 8739, complete genomephage/plasmid primase, P4 family3e-1274.7
NC_011740:448000:4485024485024508352334Escherichia fergusonii ATCC 35469, complete genomephage DNA primase3e-1274.3
NC_010498:4072681:4089863408986340921962334Escherichia coli SMS-3-5, complete genomeD5 family nucleoside triphosphatase5e-1273.9
NC_007613:4217557:4217557421755742198902334Shigella boydii Sb227, complete genomeputative DNA primase5e-1273.6
NC_011080:2870428:2886088288608828884212334Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage P4 DNA primase6e-1273.6
NC_015968:3301958:3325863332586333285352673Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein6e-1273.6
NC_017046:2896651:2896651289665128989842334Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage P4 DNA primase2e-1172
NC_016857:2871689:2897909289790929002422334Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74bacteriophage P4 DNA primase2e-1172
NC_016810:2871689:2897858289785829002422385Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage P4 DNA primase2e-1171.6
NC_011094:380428:3832303832303859022673Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein5e-1170.5
NC_003198:4676536:4692212469221246945452334Salmonella enterica subsp. enterica serovar Typhi str. CT18,Bacteriophage P4 DNA primase7e-1170.1
NC_013956:4326388:4327056432705643297282673Pantoea ananatis LMG 20103 chromosome, complete genomeAlpha6e-1170.1
NC_010102:2862178:2865648286564828679812334Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1169.7
NC_015136:2021799:2045288204528820481372850Burkholderia sp. CCGE1001 chromosome 1, complete sequenceToprim sub domain-containing protein1e-1069.3
NC_021066:5342127:5355667535566753580092343Raoultella ornithinolytica B6, complete genomeZinc binding domain / DNA primase1e-1069.3
NC_011740:810411:8262408262408289122673Escherichia fergusonii ATCC 35469, complete genomePutative inner membrane protein (modular protein) from phage origin1e-1068.9
NC_011147:4460726:4463371446337144657042334Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-1068.9
NC_006511:4465495:4468141446814144704742334Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-1068.9
NC_016845:575123:5911475911475934802334Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,nucleoside triphosphatase, D5 family2e-1068.9
NC_021172:3655206:3674302367430236767522451Hyphomicrobium denitrificans 1NES1, complete genomehypothetical protein2e-1068.6
NC_013956:3273340:3273675327367532759992325Pantoea ananatis LMG 20103 chromosome, complete genomeAlpha3e-1068.2
NC_015061:1251905:1265618126561812682932676Rahnella sp. Y9602 chromosome, complete genomehypothetical protein3e-1067.8
NC_014306:4376012:4407434440743444097642331Erwinia billingiae Eb661, complete genomePlasmid and phage DNA primase5e-1067
NC_013892:3278647:3281299328129932824681170Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase (fragment)6e-1067
NC_013508:3593000:3604038360403836063652328Edwardsiella tarda EIB202, complete genomehypothetical protein8e-1066.6
NC_007086:3334000:3334900333490033384633564Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein8e-1066.6
NC_003902:1680414:1703794170379417073573564Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein8e-1066.6
NC_010688:3229820:3232161323216132357243564Xanthomonas campestris pv. campestris, complete genomehypothetical protein8e-1066.6
NC_010688:3030873:3030873303087330343973525Xanthomonas campestris pv. campestris, complete genomehypothetical protein9e-1066.2
NC_013508:3188978:3219050321905032208851836Edwardsiella tarda EIB202, complete genomebacteriophage P4 DNA primase1e-0965.9
NC_013124:1439915:144563614456361446256621Acidimicrobium ferrooxidans DSM 10331, complete genomehypothetical protein1e-0965.9
NC_015761:2373967:2373967237396723770893123Salmonella bongori NCTC 12419, complete genomebacteriophage DNA primase1e-0965.9
NC_009778:2951207:2967702296770229701372436Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-0965.9
NC_013892:671000:6938526938526965482697Xenorhabdus bovienii SS-2004 chromosome, complete genomeprophage primase1e-0965.5
NC_012917:3684840:3686089368608936884162328Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage/plasmid primase, P4 family2e-0965.1
NC_011080:4703266:4718963471896347212932331Salmonella enterica subsp. enterica serovar Newport str. SL254,bacteriophage P4 DNA primase2e-0965.1
NC_014306:4901390:4936659493665949389892331Erwinia billingiae Eb661, complete genomePhage/plasmid primase, P4 family2e-0965.1
CP002797:2472908:2472908247290824755952688Escherichia coli NA114, complete genomeputative phage protein3e-0964.7
NC_011083:2542876:2556453255645325591402688Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,zinc-binding domain of primase-helicase family3e-0964.7
NC_014121:1101093:1113609111360911162962688Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completezinc-binding domain of primase-helicase family protein5e-0963.9
NC_009778:567000:5928395928395951542316Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-0963.2
NC_013592:2703327:2707294270729427099932700Dickeya dadantii Ech586, complete genomeprotein of unknown function DUF9278e-0963.2
NC_010694:2716348:2731726273172627345542829Erwinia tasmaniensis, complete genomePutative prophage primase1e-0862.8
NC_012880:2778795:2782217278221727848532637Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF9271e-0862.8
NC_020211:103371:1041651041651064982334Serratia marcescens WW4, complete genomeP4-specific DNA primase2e-0862
NC_002655:301940:3195023195023218922391Escherichia coli O157:H7 EDL933, complete genomealpha replication protein of prophage CP-933I2e-0862
NC_013941:338121:3604753604753628652391Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeAlpha replication protein of prophage CP-933I2e-0862
NC_002695:301939:3195583195583218912334Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA primase2e-0862
NC_011353:305820:3234383234383257712334Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenucleoside triphosphatase, D5 family2e-0862
NC_013008:306953:3247503247503270832334Escherichia coli O157:H7 str. TW14359 chromosome, complete genomealpha replication protein of prophage CP-933I2e-0862
NC_014801:1:1675416754179801227Campylobacter jejuni subsp. jejuni ICDCCJ07001 plasmid pTet,cpp222e-0862
NC_012917:833721:8345098345098368362328Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage/plasmid primase, P4 family2e-0862
NC_002927:4392768:4403880440388044059822103Bordetella bronchiseptica RB50, complete genomephage-related hypothetical protein2e-0861.6
NC_015224:3291736:3306358330635833090422685Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Zinc-binding domain of primase-helicase family3e-0861.2
NC_020211:996497:1011327101132710136752349Serratia marcescens WW4, complete genomephage/plasmid primase, P4 family4e-0860.8
NC_014029:1283500:128602212860221286777756Yersinia pestis Z176003 chromosome, complete genomeputative prophage DNA primase6e-0860.1
NC_017154:1225500:122811512281151228870756Yersinia pestis D106004 chromosome, complete genomeputative prophage DNA primase6e-0860.1
NC_017160:1507500:152274115227411523496756Yersinia pestis D182038 chromosome, complete genomeputative prophage DNA primase6e-0860.1
NC_014500:3744705:3757707375770737603432637Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC8e-0859.7
NC_005810:1130251:114511511451151146104990Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-0759.3
NC_004088:3382148:339701133970113398000990Yersinia pestis KIM, complete genomehypothetical protein1e-0759.3
NC_003143:1233128:123682512368251237784960Yersinia pestis CO92, complete genomeputative prophage DNA primase1e-0759.3
NC_008149:3251196:326609032660903267049960Yersinia pestis Nepal516, complete genomeprophage DNA primase1e-0759.3
NC_008150:650899:653561653561654520960Yersinia pestis Antiqua, complete genomeputative prophage DNA primase1e-0759.3
NC_010159:1417993:142097714209771421936960Yersinia pestis Angola, complete genome1e-0759.3
NC_017168:4155143:415884141588414159800960Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-0759.3
NC_017265:1136000:113815511381551139114960Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative prophage DNA primase1e-0759.3
NC_009381:2939782:295467529546752955634960Yersinia pestis Pestoides F chromosome, complete genomeprophage DNA primase2e-0758.5
NC_007760:2094746:2099997209999721022522256Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein3e-0757.8
NC_015381:1173603:1192541119254111952732733Burkholderia gladioli BSR3 chromosome 1, complete sequencepyocin R2_PP, TraC domain-containing protein8e-0756.6
NC_014500:2019113:2039592203959220423602769Dickeya dadantii 3937 chromosome, complete genomeDNA primase traC1e-0655.5
NC_015186:1126830:113779711377971138609813Acidiphilium multivorum AIU301, complete genomehypothetical protein9e-0652.8