Pre_GI Gene

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Host: NC_008542 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008542:2631138 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
263113826322231086hypothetical proteinBLASTP
263274926356252877inner membrane proteinQuickGO ontologyBLASTP
26357382636064327hypothetical proteinBLASTP
26360752636422348hypothetical proteinBLASTP
26365842637048465hypothetical proteinBLASTP
26374522637739288hypothetical proteinBLASTP
26377362637999264phage transcriptional regulator AlpAQuickGO ontologyBLASTP
26381182639113996hypothetical proteinBLASTP
263917926404921314hypothetical proteinBLASTP
26408382641416579Resolvase N-terminal domainQuickGO ontologyBLASTP
26414272642377951hypothetical proteinBLASTP
26431402643361222hypothetical proteinBLASTP
26434392643759321hypothetical proteinBLASTP
26446192644840222hypothetical proteinBLASTP
264492526459771053Phytanoyl-CoA dioxygenaseQuickGO ontologyBLASTP
26462992647075777O-methyltransferase family 3QuickGO ontologyBLASTP
264712226474182974Fe-4S ferredoxin iron-sulfur binding domain proteinQuickGO ontologyBLASTP
26474212647729309hypothetical proteinBLASTP
26477422648323582RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
26486262649117492hypothetical proteinBLASTP
26491782649918741short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
26500342650657624transcriptional regulator TetR familyQuickGO ontologyBLASTP
26506842651184501proteinase inhibitor I11 ecotinQuickGO ontologyBLASTP
26513282651654327hypothetical proteinBLASTP
26518522652214363hypothetical proteinBLASTP
26523712652751381hypothetical proteinBLASTP
265293426543011368major facilitator superfamily MFS_1QuickGO ontologyBLASTP
26543362654929594ATPase-like proteinQuickGO ontologyBLASTP
265492226563431422alphaalpha-trehalose-phosphate synthase UDP-formingQuickGO ontologyBLASTP
26564822656739258hypothetical proteinBLASTP
26569412657531591hypothetical proteinBLASTP
26575282658022495hypothetical proteinBLASTP