Pre_GI Gene

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Host: NC_011001 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011001:372185 Burkholderia cenocepacia J2315 chromosome 2, complete sequence

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain is the index strain for transmission among CF patients in the UK. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3721853744762292putative cation-transporting ATPaseQuickGO ontologyBLASTP
374498375448951putative universal stress proteinQuickGO ontologyBLASTP
375658376224567putative cytochrome b561QuickGO ontologyBLASTP
376268376642375hypothetical protein
376806377468663two-component regulatory system response regulator proteinQuickGO ontologyBLASTP
3774653788171353two-component regulatory system sensor kinaseQuickGO ontologyBLASTP
379651380298648putative type IV secretion system protein VirB1QuickGO ontologyBLASTP
380323380676354putative type IV secretion system protein VirB2QuickGO ontologyBLASTP
380678381016339putative type IV secretion system protein VirB3QuickGO ontologyBLASTP
3810183834982481putative type IV secretion system protein VirB4QuickGO ontologyBLASTP
3834953846461152putative type IV secretion system protein VirB6QuickGO ontologyBLASTP
384662385372711hypothetical proteinBLASTP
385384385557174putative lipoproteinQuickGO ontology
385554386258705putative type IV secretion system protein VirB8QuickGO ontologyBLASTP
386255387079825putative type IV secretion system protein VirB9QuickGO ontologyBLASTP
3870723882951224putative type IV secretion system protein VirB10QuickGO ontologyBLASTP
3883463894431098putative type IV secretion system protein VirB11QuickGO ontologyBLASTP
3915163933631848hypothetical proteinBLASTP
3934413944511011hypothetical proteinBLASTP
394458394976519hypothetical proteinBLASTP
3949783960331056hypothetical proteinBLASTP
396236396835600FMN-dependent NADH-azoreductaseQuickGO ontologyBLASTP
396948397865918LysR family regulatory proteinQuickGO ontologyBLASTP
397905398714810putative redoxinQuickGO ontologyBLASTP
398916399059144hypothetical protein