Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:5031819 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
50314785031822345hypothetical proteinBLASTP
503181950329791161prophage Clp protease-like proteinQuickGO ontologyBLASTP
503297650344571482phage portal lambda familyQuickGO ontologyBLASTP
50344575034663207hypothetical proteinBLASTP
503466550366772013Phage terminase large subunitQuickGO ontologyBLASTP
50366825037284603terminase small subunitQuickGO ontologyBLASTP
50374325037776345pyocin holinQuickGO ontologyBLASTP
50382885038647360hypothetical proteinBLASTP
503864050408592220virulence-associated e family proteinQuickGO ontologyBLASTP
50408495041076228C4-type zinc finger protein DksATraR familyQuickGO ontologyBLASTP
50410695041587519bacteriophage proteinQuickGO ontologyBLASTP
50419185042151234hypothetical protein
50422495042896648peptidase s24-like domain proteinQuickGO ontologyBLASTP
504292750439281002hypothetical proteinBLASTP
50442755044859585hypothetical proteinBLASTP
50448705045154285DNA-binding protein Roi-related proteinQuickGO ontologyBLASTP
50453135045642330transcriptional regulatorQuickGO ontologyBLASTP
50456865046102417hypothetical proteinBLASTP
50460995046320222hypothetical proteinBLASTP
50463175046859543metal dependent phosphohydrolaseQuickGO ontologyBLASTP
504728150484891209phage integraseQuickGO ontologyBLASTP
50485125049057546protein FolE2QuickGO ontologyBLASTP
50491625049533372glutaredoxinQuickGO ontologyBLASTP
504968750508531167aspB-4QuickGO ontologyBLASTP
50509365051382447MarR family transcriptional regulatorQuickGO ontologyBLASTP
505154550527951251transposaseQuickGO ontologyBLASTP