Pre_GI Gene

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Host: NC_011835 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011835:965977 Bifidobacterium animalis subsp. lactis AD011 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Isolated from the fecal sample of a healthy, breast-fed infant. Normal gut bacterium. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9659779675481572Xaa-Pro aminopeptidaseQuickGO ontologyBLASTP
967572968099528Nudix hydrolase family proteinQuickGO ontologyBLASTP
968122968226105hypothetical proteinBLASTP
9683529695571206Rok NagCXylR family transcriptional repressorQuickGO ontologyBLASTP
969620970516897protein in PfkB family of sugar kinasesQuickGO ontologyBLASTP
970603971082480D-tyrosyl-tRNATyr deacylaseQuickGO ontologyBLASTP
9713559724551101phage-related integraseQuickGO ontologyBLASTP
972668973324657hypothetical proteinBLASTP
973437973643207hypothetical proteinBLASTP
973883974119237hypothetical proteinBLASTP
974124974315192hypothetical proteinBLASTP
9744859756871203ATP-dependent serine proteaseQuickGO ontologyBLASTP
975925976197273hypothetical proteinBLASTP
976194976382189hypothetical proteinBLASTP
976405976641237hypothetical proteinBLASTP
976638976955318hypothetical proteinBLASTP
9773719791341764phage prohead protease HK97 familyQuickGO ontologyBLASTP
979146979367222hypothetical proteinBLASTP
9801079818371731ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
9818279830441218peptides ABC transporter permeaseQuickGO ontologyBLASTP
9830469841371092peptides ABC transporter permeaseQuickGO ontologyBLASTP
9860999874811383cell division proteinQuickGO ontologyBLASTP
9875139890901578UDP-N-acetylmuramate--L-alanine ligaseQuickGO ontologyBLASTP