Pre_GI Gene

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Host: NC_010501 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010501:4787963 Pseudomonas putida W619, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
47879634788298336preprotein translocase YajC subunitQuickGO ontologyBLASTP
478834347894761134queuine tRNA-ribosyltransferaseQuickGO ontologyBLASTP
478947347905221050S-adenosylmethionine--tRNA-ribosyltransferase- isomeraseQuickGO ontologyBLASTP
4790631479071585tRNA-LeuQuickGO ontologyBLASTP
479092447921321209integrase family proteinQuickGO ontologyBLASTP
47921544793014861hypothetical proteinBLASTP
47931144793338225phage transcriptional regulator AlpAQuickGO ontologyBLASTP
47941884794598411virulence-associated protein EQuickGO ontologyBLASTP
479459547957821188hypothetical proteinBLASTP
47961914796415225hypothetical protein
479641847982801863peptidase S14 ClpPQuickGO ontologyBLASTP
479829447996311338integrase family proteinQuickGO ontologyBLASTP
48001954800440246hypothetical protein
480065648019871332filamentation induced by cAMP protein FicQuickGO ontologyBLASTP
48023384802961624hypothetical protein
48031614804084924protein of unknown function UPF0187QuickGO ontologyBLASTP
48040564804823768phosphonate ABC transporter inner membrane subunitQuickGO ontologyBLASTP
48048204805647828binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
48056414806435795ABC transporter relatedQuickGO ontologyBLASTP
48064324807286855phosphonate ABC transporter periplasmic phosphonate-binding proteinQuickGO ontologyBLASTP