Pre_GI Gene

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Host: NC_011094 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011094:380428 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3792413804311191site-specific recombinase phage integrase family proteinQuickGO ontologyBLASTP
380428381252825hypothetical proteinBLASTP
381705381839135hypothetical proteinBLASTP
382009382185177phage immunity repressor proteinQuickGO ontologyBLASTP
382178382537360hypothetical proteinBLASTP
382569382853285hypothetical proteinBLASTP
382850383233384hypothetical proteinBLASTP
3832303859022673hypothetical proteinBLASTP
385963386181219hypothetical protein
386302387063762capsid morphogenesis protein encoded in CP-933IQuickGO ontologyBLASTP
387114387335222activator encoded in prophage CP-933IQuickGO ontologyBLASTP
387522387644123hypothetical protein
387675388658984ATPase AAAQuickGO ontologyBLASTP
3886773911212445Y4bN proteinQuickGO ontologyBLASTP
391509391703195outer membrane proteinQuickGO ontologyBLASTP
391751392509759fimbrial chaperone proteinQuickGO ontologyBLASTP
3924753938001326fimbrial usherQuickGO ontologyBLASTP
3938053963662562outer membrane fimbrial usher proteinQuickGO ontologyBLASTP
396350397111762fimbrial chaperone proteinQuickGO ontologyBLASTP
397173397709537fimbrial protein major subunitQuickGO ontologyBLASTP
398373399107735transmembrane regulatorQuickGO ontologyBLASTP
399080399580501hypothetical proteinBLASTP
3999174014671551cyclic diguanylate phosphodiesterase EAL domain-containing proteinQuickGO ontologyBLASTP
401567402310744response regulatorQuickGO ontologyBLASTP
402283402771489hypothetical proteinBLASTP