Pre_GI Gene

Some Help

Host: NC_017215 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017215:1361822 Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
136182213635071686Xaa-Pro aminopeptidaseQuickGO ontologyBLASTP
13634291364058630Hydrolase acting on acid anhydrides in phosphorous-containing anhydridesQuickGO ontologyBLASTP
13640811364185105hypothetical proteinBLASTP
136429013655161227Transcriptional repressorQuickGO ontologyBLASTP
13655791366475897fructokinaseQuickGO ontologyBLASTP
13665621367041480Hydrolase acting on ester bondsQuickGO ontologyBLASTP
136731413684141101DNA integrationrecombinationinversion proteinQuickGO ontologyBLASTP
13686271369289663cytosolic proteinQuickGO ontologyBLASTP
13693961369602207Phage regulatory proteinQuickGO ontologyBLASTP
13697371369874138hypothetical proteinBLASTP
13698421370078237hypothetical proteinBLASTP
13700831370274192hypothetical proteinBLASTP
13702621370453192hypothetical proteinBLASTP
137038413716461263hypothetical proteinBLASTP
13718331372156324hypothetical proteinBLASTP
13721531372341189hypothetical proteinBLASTP
13723641372600237hypothetical proteinBLASTP
13725971372914318cytosolic proteinQuickGO ontologyBLASTP
137331813750931776Phage Prohead ProteaseQuickGO ontologyBLASTP
13750901375326237cytosolic proteinQuickGO ontologyBLASTP
13758171375936120hypothetical proteinBLASTP
137606813777981731protein DppDQuickGO ontologyBLASTP
137778813790051218protein DppCQuickGO ontologyBLASTP
137900713801821176protein DppBQuickGO ontologyBLASTP
13802061380790585Dipeptide-binding proteinQuickGO ontologyBLASTP
13817261381830105hypothetical protein
138206013834421383hypothetical proteinBLASTP
138347413852401767UDP-N-acetylmuramate--L-alanine ligaseQuickGO ontologyBLASTP