Pre_GI Gene

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Host: NC_017217 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017217:1362573 Bifidobacterium animalis subsp. lactis V9 chromosome, complete

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
136257313641441572Xaa-Pro aminopeptidaseQuickGO ontologyBLASTP
13641681364695528hypothetical proteinBLASTP
136494813661531206ROK family transcriptional regulatorQuickGO ontologyBLASTP
136621613671128972-dehydro-3-deoxygluconokinaseQuickGO ontologyBLASTP
13672111367678468D-tyrosyl-tRNA deacylaseQuickGO ontologyBLASTP
136795113690511101phage-related integraseQuickGO ontologyBLASTP
13692641369881618hypothetical proteinBLASTP
13700331370239207hypothetical proteinBLASTP
13702541370466213hypothetical proteinBLASTP
13704791370715237hypothetical proteinBLASTP
13707201370911192hypothetical proteinBLASTP
13708991371090192hypothetical proteinBLASTP
137108113722831203hypothetical proteinBLASTP
13725211372793273hypothetical proteinBLASTP
13727901372978189hypothetical proteinBLASTP
13730011373237237hypothetical proteinBLASTP
13732341373551318hypothetical proteinBLASTP
137396713757301764HK97 family phage prohead proteaseQuickGO ontologyBLASTP
13757421375963222hypothetical proteinBLASTP
137670513784351731ABC-type peptide transport system ATPase componentQuickGO ontologyBLASTP
137842513796121188peptide ABC transporter permeaseQuickGO ontologyBLASTP
137964413807351092ABC-type dipeptideoligopeptidenickel transport systems permease componentQuickGO ontologyBLASTP
138269713839501254cell division proteinQuickGO ontologyBLASTP