Pre_GI: BLASTP Hits

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Query: NC_009092:3783000:3783257 Shewanella loihica PV-4, complete genome

Start: 3783257, End: 3784588, Length: 1332

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:207089:2097282097282110711344Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein1e-116420
NC_016446:979884:9825239825239838661344Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein1e-116420
NC_012667:46432:6250062500638431344Vibrio cholerae MJ-1236 chromosome 2, complete genomemethionine transporter MetT1e-116420
NC_012580:207025:2096762096762110191344Vibrio cholerae M66-2 chromosome II, complete sequenceNa+/H+ antiporter1e-116420
NC_002506:207097:2097482097482110911344Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeNa+/H+ antiporter, putative1e-116420
NC_015497:3497680:3516919351691935182501332Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeNa+/H+ antiporter NhaC-like protein8e-109394
NC_007645:1698803:1720380172038017216991320Hahella chejuensis KCTC 2396, complete genomeNa+/H+ antiporter4e-103375
NC_014377:1512217:1534279153427915355741296Thermosediminibacter oceani DSM 16646 chromosome, complete genomeputative methionine transporter, NhaC family (TC 2.A.35.1.-)1e-101370
NC_003454:2080705:2082039208203920833761338Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNA+/H+ antiporter NHAC4e-92338
NC_015519:924000:9347329347329360271296Tepidanaerobacter sp. Re1 chromosome, complete genomeNa+/H+ antiporter NhaC-like protein5e-90331
NC_008260:3053775:3058906305890630602521347Alcanivorax borkumensis SK2, complete genomeNa+/H+ antiporter, putative6e-88325
NC_004557:2677155:2685673268567326870311359Clostridium tetani E88, complete genomeNa+/H+ antiporter2e-85316
NC_013171:1677543:1700217170021717015211305Anaerococcus prevotii DSM 20548, complete genomeNa+/H+ antiporter NhaC7e-83308
NC_012658:1617902:1622342162234216237391398Clostridium botulinum Ba4 str. 657 chromosome, complete genomeNa+/H+ antiporter family protein8e-83307
NC_009615:711125:7175017175017187961296Parabacteroides distasonis ATCC 8503 chromosome, complete genomeNa+/H+ antiporter7e-82304
NC_015425:405058:4176384176384189721335Clostridium botulinum BKT015925 chromosome, complete genomeNa+/H+ antiporter family protein7e-81301
NC_008593:1797000:1800154180015418015271374Clostridium novyi NT, complete genomeNa+/H+ antiporter family protein7e-81301
NC_019842:484933:5400765400765413651290Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,Malate-2H(+)/Na(+)-lactate antiporter3e-68259
NC_020410:495184:5355525355525368411290Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative Na+/H+ antiporter2e-68259
NC_020272:3396800:3398220339822033995091290Bacillus amyloliquefaciens IT-45, complete genomeNa(+)/H(+) antiporter nhaC Sodium/proton antiporter1e-67257
NC_015164:1158796:1163208116320811645121305Bacteroides salanitronis DSM 18170 chromosome, complete genomeNa+/H+ antiporter NhaC5e-66252
UCMB5137:2054735:2076859207685920781481290Bacillus atrophaeus UCMB-5137putative Na+/H+ antiporter2e-60233
NC_017347:2437902:2444305244430524456181314Staphylococcus aureus subsp. aureus T0131 chromosome, completeNa+/H+ antiporter family protein2e-60233
NC_013204:929434:9532219532219545551335Eggerthella lenta DSM 2243, complete genomeNa+/H+ antiporter NhaC9e-54211
NC_014364:2562281:2573010257301025743441335Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeNa+/H+ antiporter NhaC1e-50201
NC_013410:1152188:1169512116951211708551344Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Na+/H+ antiporter NhaC-like protein3e-49196
NC_018870:2479114:2488367248836724898151449Thermacetogenium phaeum DSM 12270 chromosome, complete genomeNa+/H+ antiporter4e-1686.7
NC_013895:1086500:1089204108920410905861383Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeNa+/H+ antiporter NhaC3e-1583.2
NC_009524:263587:2661072661072675911485Psychrobacter sp. PRwf-1 chromosome, complete genomeNa+/H+ antiporter NhaC3e-1583.2
NC_013456:3011518:3017418301741830189411524Vibrio sp. Ex25 chromosome 1, complete genomeNa+/H+ antiporter NhaC5e-1582.8
NC_009708:633054:6385216385216399721452Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeNa+/H+ antiporter family protein1e-1481.6
NC_006155:4062000:4072289407228940737401452Yersinia pseudotuberculosis IP 32953, complete genomeputative Na+/H+ antiporter, NhaC family1e-1481.6
NC_004088:3923804:3933688393368839351391452Yersinia pestis KIM, complete genomehypothetical protein1e-1481.3
NC_008150:3495851:3506589350658935080401452Yersinia pestis Antiqua, complete genomehypothetical protein1e-1481.3
NC_005810:3272765:3278232327823232796831452Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-1481.3
NC_003143:675622:6854006854006868511452Yersinia pestis CO92, complete genomehypothetical protein1e-1481.3
NC_008149:587689:5969305969305983811452Yersinia pestis Nepal516, complete genomemembrane protein1e-1481.3
NC_010465:660207:6656746656746671251452Yersinia pseudotuberculosis YPIII, complete genomeNa+/H+ antiporter NhaC1e-1481.3
NC_017154:671816:6810616810616825121452Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-1481.3
NC_010159:1071937:1079454107945410808661413Yersinia pestis Angola, complete genomeNa+/H+ antiporter family protein2e-1480.9
NC_014029:729675:7389487389487403601413Yersinia pestis Z176003 chromosome, complete genomeNa+/H+ antiporter family protein2e-1480.9
NC_017160:676249:6832856832856846971413Yersinia pestis D182038 chromosome, complete genomeNa+/H+ antiporter family protein2e-1480.9
NC_006582:1017000:1017468101746810188711404Bacillus clausii KSM-K16, complete genomeNa+:H+ antiporter1e-1275.1
NC_007963:3574000:3577282357728235788351554Chromohalobacter salexigens DSM 3043, complete genomeNa+/H+ antiporter NhaC2e-1273.9
NC_007963:1582089:1600093160009316016011509Chromohalobacter salexigens DSM 3043, complete genomeNa+/H+ antiporter NhaC2e-1170.9
NC_015731:1381737:1384891138489113863151425Nitrosomonas sp. Is79A3 chromosome, complete genomeNa+/H+ antiporter NhaC3e-1170.1
NC_003910:2588000:2592360259236025938681509Colwellia psychrerythraea 34H, complete genomeNa+/H+ antiporter NhaC7e-1168.9
NC_009922:315870:3231243231243245541431Alkaliphilus oremlandii OhILAs, complete genomeNa+/H+ antiporter NhaC1e-1068.2
NC_003454:983681:9836819836819850601380Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNA+/H+ antiporter NHAC2e-1067.8
NC_018604:1534074:1535271153527115367011431Brachyspira pilosicoli WesB complete genomeputative Na+/H+ antiporter2e-1067
NC_010610:1649500:1649804164980416510211218Lactobacillus fermentum IFO 3956, complete genomeNa-H antiporter4e-1066.6
NC_008344:554229:5670505670505684771428Nitrosomonas eutropha C91, complete genomeNa+/H+ antiporter NhaC3e-1066.6
NC_004663:163152:1631521631521645791428Bacteroides thetaiotaomicron VPI-5482, complete genomeNa(+)/H(+) antiporter3e-1066.6
NC_013204:74855:9368593685953431659Eggerthella lenta DSM 2243, complete genomeNa+/H+ antiporter NhaC7e-1065.5
NC_017361:930280:9321039321039335931491Helicobacter pylori SouthAfrica7 chromosome, complete genomehypothetical protein8e-1065.5
NC_010634:4001154:4012848401284840139571110Yersinia pseudotuberculosis PB1/+, complete genomeNa+/H+ antiporter family protein1e-0964.7
NC_003454:339345:3499903499903515671578Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNA+/H+ antiporter NHAC1e-0964.7
NC_012883:1421644:1422182142218214238641683Thermococcus sibiricus MM 739, complete genomeNa+/H+ antiporter, putative, NhaC family1e-0964.7
NC_013922:1201456:1204912120491212066061695Natrialba magadii ATCC 43099 chromosome, complete genomeNa+/H+ antiporter NhaC-like protein1e-0964.7
NC_009381:460358:4673564673564684651110Yersinia pestis Pestoides F chromosome, complete genome2e-0964.3
NC_007907:5404608:5421786542178654232311446Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0964.3
NC_010718:2860096:2878515287851528799391425Natranaerobius thermophilus JW/NM-WN-LF, complete genomeNa+/H+ antiporter NhaC3e-0963.5
NC_011963:1482042:1486529148652914880191491Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceNa+/H+ antiporter NhaC3e-0963.5
NC_008530:1454118:1488355148835514897311377Lactobacillus gasseri ATCC 33323, complete genomeNa+/H+ antiporter8e-0962
NC_012029:1759291:1760593176059317622781686Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genomeNa+/H+ antiporter NhaC8e-0962
NC_008345:3287000:3301054330105433026101557Shewanella frigidimarina NCIMB 400, complete genomeNa+/H+ antiporter NhaC8e-0962
NC_014166:2055984:2077667207766720793821716Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeNa+/H+ antiporter NhaC1e-0861.6
NC_021066:3703725:3714412371441237158301419Raoultella ornithinolytica B6, complete genomeNa+/H+ antiporter NhaC-like protein1e-0861.2
NC_010498:4967724:4980928498092849823311404Escherichia coli SMS-3-5, complete genomeNa+/H+ antiporter IbeT1e-0861.2
NC_014614:2500301:2518175251817525196051431Clostridium sticklandii, complete genomeNa+/H+ antiporter NhaC3e-0860.5
NC_014618:1103239:1121293112129311227321440Enterobacter cloacae SCF1 chromosome, complete genomeNa+/H+ antiporter NhaC4e-0860.1
NC_010520:496500:5175405175405193061767Clostridium botulinum A3 str. Loch Maree, complete genomeNa+/H+ antiporter family protein1e-0757.8
NC_016745:546249:5516415516415531041464Oceanimonas sp. GK1 chromosome, complete genomeNa+/H+ antiporter NhaC2e-0757.8
NC_010516:514000:5344675344675362331767Clostridium botulinum B1 str. Okra, complete genomeNa+/H+ antiporter family protein2e-0757.8
NC_012563:519037:5423715423715441371767Clostridium botulinum A2 str. Kyoto, complete genomeNa+/H+ antiporter family protein2e-0757.8
NC_012658:482313:5055145055145072801767Clostridium botulinum Ba4 str. 657 chromosome, complete genomeNa+/H+ antiporter family protein2e-0757.8
NC_009697:444801:4677824677824695481767Clostridium botulinum A str. ATCC 19397 chromosome, completeNa+/H+ antiporter family protein1e-0757.8
NC_009698:467500:4881704881704899361767Clostridium botulinum A str. Hall chromosome, complete genomeNa+/H+ antiporter family protein1e-0757.8
NC_009699:490652:5141585141585159241767Clostridium botulinum F str. Langeland chromosome, complete genomeNa+/H+ antiporter family protein1e-0757.8
NC_017297:490922:5144275144275161931767Clostridium botulinum F str. 230613 chromosome, complete genomeNa+/H+ antiporter family protein1e-0757.8
NC_015565:1075693:1096107109610710974951389Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeNa+/H+ antiporter NhaC-like protein3e-0757
NC_000868:269923:2931072931072947081602Pyrococcus abyssi GE5, complete genomehypothetical protein9e-0755.5
NC_014378:525717:5275905275905290981509Acetohalobium arabaticum DSM 5501 chromosome, complete genometransporter, NhaC family (TC 2.A.35)1e-0655.1
NC_014727:1736500:1736727173672717381061380Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,na(+)/h(+) antiporter1e-0655.1
NC_012673:77610:9306593065944921428Exiguobacterium sp. AT1b, complete genomeNa+/H+ antiporter NhaC9e-0755.1
NC_009633:3522933:3535536353553635369361401Alkaliphilus metalliredigens QYMF chromosome, complete genomeNa+/H+ antiporter NhaC2e-0654.7
NC_013744:300000:3176743176743194581785Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completeNa+/H+ antiporter NhaC-like protein2e-0654.3
NC_019974:1280500:1292746129274612943141569Natronococcus occultus SP4, complete genomeNa+/H+ antiporter2e-0654.3
NC_010519:1411347:1413975141397514155221548Haemophilus somnus 2336 chromosome, complete genomehypothetical protein2e-0653.9
NC_008309:842072:8438158438158453621548Haemophilus somnus 129PT, complete genomeNa(+)/H(+) antiporter3e-0653.5
NC_014632:11925:2952329523308631341Ilyobacter polytropus DSM 2926 chromosome, complete genometransporter, NhaC family3e-0653.1
NC_014654:2277461:2295226229522622966561431Halanaerobium sp. 'sapolanicus' chromosome, complete genomeNa+/H+ antiporter NhaC-like protein6e-0652.8
NC_008309:842072:8625008625008639091410Haemophilus somnus 129PT, complete genomeNa(+)/H(+) antiporter9e-0652