Pre_GI: BLASTN Hits

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Query: NC_017986:3407913 Pseudomonas putida ND6 chromosome, complete genome

Start: 3407913, End: 3437671, Length: 29759

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome09531BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome07868BLASTN svgBLASTP svg
NC_015733:715947*71594774917233226Pseudomonas putida S16 chromosome, complete genome04238BLASTN svgBLASTP svg
NC_010501:4989455*4989455501446425010Pseudomonas putida W619, complete genome02484BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome01122BLASTN svgBLASTP svg
NC_007492:31804803180480323474054261Pseudomonas fluorescens PfO-1, complete genome01059BLASTN svgBLASTP svg
NC_008782:2326439*2326439236857442136Acidovorax sp. JS42, complete genome0916BLASTN svgBLASTP svg
NC_012560:2026483*2026483204663320151Azotobacter vinelandii DJ, complete genome0876BLASTN svgBLASTP svg
NC_021150:2026496*2026496204664620151Azotobacter vinelandii CA6, complete genome0876BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome0795BLASTN svgBLASTP svg
NC_020209:19865031986503202425537753Pseudomonas poae RE*1-1-14, complete genome0696BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome7e-94353BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome5e-76293BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome2e-63252BLASTN svgBLASTP svg
NC_004431:43191524319152434223723086Escherichia coli CFT073, complete genome2e-51212BLASTN svgBLASTP svg
NC_008563:47078264707826473072322898Escherichia coli APEC O1, complete genome2e-51212BLASTN svgBLASTP svg
NC_010498:11179381117938114953131594Escherichia coli SMS-3-5, complete genome2e-51212BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome4e-46194BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome2e-44188BLASTN svgBLASTP svg
NC_005773:95174495174497731525572Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-39172BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-33153BLASTN svgBLASTP svg
NC_004129:5723787*5723787575817934393Pseudomonas fluorescens Pf-5, complete genome8e-32147BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome7e-29137BLASTN svgBLASTP svg
NC_015733:11799771179977119809918123Pseudomonas putida S16 chromosome, complete genome7e-29137BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome7e-29137BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-25125BLASTN svgBLASTP svg
NC_002947:46045824604582462867624095Pseudomonas putida KT2440, complete genome4e-24121BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome3e-22115BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome3e-22115BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome3e-22115BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-21113BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome4e-21111BLASTN svgBLASTP svg
NC_014752:131994*13199415436422371Neisseria lactamica ST-640, complete genome4e-21111BLASTN svgBLASTP svg
NC_005773:48992524899252493544536194Pseudomonas syringae pv. phaseolicola 1448A, complete genome7e-20107BLASTN svgBLASTP svg
NC_013223:2609697*2609697264530735611Desulfohalobium retbaense DSM 5692, complete genome1e-18103BLASTN svgBLASTP svg
NC_015556:4074367*4074367410534530979Pseudomonas fulva 12-X chromosome, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_008027:4280000*4280000430482424825Pseudomonas entomophila L48, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_009512:31189073118907313838119475Pseudomonas putida F1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_021150:1677811*1677811170249124681Azotobacter vinelandii CA6, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_012560:1677798*1677798170247824681Azotobacter vinelandii DJ, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012559:1663214*1663214168255819345Laribacter hongkongensis HLHK9, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004578:48696734869673488861018938Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010943:1379707*1379707140629326587Stenotrophomonas maltophilia K279a, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015572:4618467*4618467464627927813Methylomonas methanica MC09 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_012791:4007780*4007780403067322894Variovorax paradoxus S110 chromosome 1, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_014924:72538072538075060925230Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008027:2621443*2621443264643624994Pseudomonas entomophila L48, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008782:84113484113486233621203Acidovorax sp. JS42, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_009434:1156834*1156834117518418351Pseudomonas stutzeri A1501, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015740:1017000*1017000104061723618Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete6e-1177.8BLASTN svgBLASTP svg
NC_012660:165559*16555920054534987Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007973:49960649960652396824363Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_007759:23154902315490233759922110Syntrophus aciditrophicus SB, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009434:1580205*1580205160112420920Pseudomonas stutzeri A1501, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011071:35444503544450356909924650Stenotrophomonas maltophilia R551-3, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011992:3615517*3615517363908923573Acidovorax ebreus TPSY, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015422:3581848*3581848360595924112Alicycliphilus denitrificans K601 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015677:39657163965716398829822583Ramlibacter tataouinensis TTB310 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009800:289000*28900031038921390Escherichia coli HS, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009648:293052*29305232674733696Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008563:28713628713630584318708Escherichia coli APEC O1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007384:307013*30701333111524103Shigella sonnei Ss046, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006905:368942*36894239327424333Salmonella enterica subsp. enterica serovar Choleraesuis str4e-0971.9BLASTN svgBLASTP svg
NC_004741:310382*31038233778027399Shigella flexneri 2a str. 2457T, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004631:2584244*2584244260559921356Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-0971.9BLASTN svgBLASTP svg
NC_004547:3866439*3866439389314026702Erwinia carotovora subsp. atroseptica SCRI1043, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004337:309833*30983333864628814Shigella flexneri 2a str. 301, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_003197:36743036743038660919180Salmonella typhimurium LT2, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_011083:374000*37400039609922100Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-0971.9BLASTN svgBLASTP svg
NC_012779:91600091600093379317794Edwardsiella ictaluri 93-146, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_021066:3028421*3028421305110422684Raoultella ornithinolytica B6, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_020260:3004500*3004500302796523466Cronobacter sakazakii Sp291, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_020211:996497*996497103223335737Serratia marcescens WW4, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_020063:3690308*3690308375363663329Enterobacteriaceae bacterium strain FGI 57, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-0971.9BLASTN svgBLASTP svg
NC_014500:3744705*3744705376630221598Dickeya dadantii 3937 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014121:1101093*1101093113435733265Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-0971.9BLASTN svgBLASTP svg
NC_013716:357928*35792840652048593Citrobacter rodentium ICC168, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013508:876431*87643191551339083Edwardsiella tarda EIB202, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013421:3752619*3752619377249719879Pectobacterium wasabiae WPP163, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013282:923500*92350094659923100Cronobacter turicensis, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012917:3684840*3684840370871823879Pectobacterium carotovorum subsp. carotovorum PC1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007005:45158534515853454582229970Pseudomonas syringae pv. syringae B728a, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011992:77390577390579750923605Acidovorax ebreus TPSY, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015740:45083754508375452814119767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_015947:35394723539472355883219361Burkholderia sp. JV3 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002947:12680891268089129343025342Pseudomonas putida KT2440, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_004129:17418161741816177185030035Pseudomonas fluorescens Pf-5, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011901:83708583708586771530631Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete6e-0867.9BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008781:4178115*4178115422557447460Polaromonas naphthalenivorans CJ2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012791:25905002590500260886218363Variovorax paradoxus S110 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014761:1715377*1715377173823422858Oceanithermus profundus DSM 14977 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_015410:1144272*1144272116462620355Pseudomonas mendocina NK-01 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015556:41183044118304414271224409Pseudomonas fulva 12-X chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007705:3429493*3429493345339023898Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010501:4379920*4379920440315523236Pseudomonas putida W619, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_010717:35649553564955358709922145Xanthomonas oryzae pv. oryzae PXO99A, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014910:966761*96676199256725807Alicycliphilus denitrificans BC chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015422:910292*91029293677826487Alicycliphilus denitrificans K601 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015733:1793399*1793399181802124623Pseudomonas putida S16 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015733:21946762194676221628521610Pseudomonas putida S16 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009439:20545205454442723883Pseudomonas mendocina ymp, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009439:3394174*3394174341925525082Pseudomonas mendocina ymp, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014931:64159406415940643897523036Variovorax paradoxus EPS chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome3e-0661.9BLASTN svgBLASTP svg