Pre_GI: BLASTN Hits

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Query: NC_011601:3951324 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 3951324, End: 3974143, Length: 22820

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008258:35815833581583360816926587Shigella flexneri 5 str. 8401, complete genome010120BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome010120BLASTN svgBLASTP svg
NC_015968:204969*20496922599121023Enterobacter asburiae LF7a chromosome, complete genome02474BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome01070BLASTN svgBLASTP svg
NC_013421:57961579617736519405Pectobacterium wasabiae WPP163, complete genome0674BLASTN svgBLASTP svg
NC_006905:3780000*3780000380296822969Salmonella enterica subsp. enterica serovar Choleraesuis str9e-176624BLASTN svgBLASTP svg
NC_015224:4386599*4386599441050923911Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,2e-142513BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome1e-137498BLASTN svgBLASTP svg
NC_013961:3709800*3709800373182522026Erwinia amylovora, complete genome2e-99371BLASTN svgBLASTP svg
NC_012214:3931824*3931824395459922776Erwinia pyrifoliae Ep1/96, complete genome2e-65258BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome3e-24121BLASTN svgBLASTP svg
NC_007384:1320287*1320287134781127525Shigella sonnei Ss046, complete genome3e-24121BLASTN svgBLASTP svg
NC_007908:1328832*1328832136532136490Rhodoferax ferrireducens T118, complete genome5e-23117BLASTN svgBLASTP svg
NC_010658:3014371*3014371303259918229Shigella boydii CDC 3083-94, complete genome2e-22115BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome8e-22113BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome8e-22113BLASTN svgBLASTP svg
NC_007384:38970003897000391653419535Shigella sonnei Ss046, complete genome8e-22113BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome8e-22113BLASTN svgBLASTP svg
NC_018868:1352000*1352000138222930230Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome8e-22113BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome5e-20107BLASTN svgBLASTP svg
CP002185:3475991*3475991350005224062Escherichia coli W, complete genome5e-20107BLASTN svgBLASTP svg
CP002516:613462*61346263169018229Escherichia coli KO11, complete genome5e-20107BLASTN svgBLASTP svg
CU928160:3344746*3344746336309918354Escherichia coli IAI1 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_000913:3256307*3256307327821621910Escherichia coli K12, complete genome5e-20107BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome5e-20107BLASTN svgBLASTP svg
NC_009800:3307123*3307123332547318351Escherichia coli HS, complete genome5e-20107BLASTN svgBLASTP svg
NC_009801:35950013595001361359918599Escherichia coli E24377A, complete genome5e-20107BLASTN svgBLASTP svg
NC_010468:61381261381263388120070Escherichia coli ATCC 8739, complete genome5e-20107BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome5e-20107BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_004337:32497913249791327283723047Shigella flexneri 2a str. 301, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_004741:3240909*3240909326236621458Shigella flexneri 2a str. 2457T, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008258:32247213224721324719422474Shigella flexneri 5 str. 8401, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014121:16533851653385167270919325Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete1e-1799.6BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_007384:10860251086025111635930335Shigella sonnei Ss046, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_004129:10149861014986103609921114Pseudomonas fluorescens Pf-5, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009832:2969376*2969376299269223317Serratia proteamaculans 568, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009512:10253651025365104401118647Pseudomonas putida F1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009778:14778411477841150009922259Enterobacter sakazakii ATCC BAA-894, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009832:42698044269804429650026697Serratia proteamaculans 568, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020260:1535394*1535394155809922706Cronobacter sakazakii Sp291, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013947:613774*61377463382720054Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020260:3004500*3004500302796523466Cronobacter sakazakii Sp291, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007513:1900000*1900000192383823839Synechococcus sp. CC9902, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015061:2867027*2867027288717520149Rahnella sp. Y9602 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015566:43500804350080437739527316Serratia sp. AS12 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007643:2722265*2722265275282330559Rhodospirillum rubrum ATCC 11170, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010694:12508411250841127452923689Erwinia tasmaniensis, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010998:11105211105213523024179Rhizobium etli CIAT 652 plasmid pA, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_012214:20190002019000204685227853Erwinia pyrifoliae Ep1/96, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011751:39842363984236400841624181Escherichia coli UMN026 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007908:10101621010162103411423953Rhodoferax ferrireducens T118, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007413:1405817*1405817142811722301Anabaena variabilis ATCC 29413, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002678:50606705060670511283352164Mesorhizobium loti MAFF303099, complete genome2e-1075.8BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008148:2290806*2290806231729826493Rubrobacter xylanophilus DSM 9941, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013530:3365742*3365742338937923638Xylanimonas cellulosilytica DSM 15894, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015588:2939747*2939747296269722951Isoptericola variabilis 225 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003143:18800001880000190232522326Yersinia pestis CO92, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005810:19760001976000199860722608Yersinia pestis biovar Microtus str. 91001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007777:5087405*5087405511177224368Frankia sp. CcI3, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008146:5106775*5106775513109924325Mycobacterium sp. MCS, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008705:5144433*5144433517009925667Mycobacterium sp. KMS, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010159:29555622955562297845722896Yersinia pestis Angola, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012880:13550813550816052825021Dickeya dadantii Ech703, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014500:20191132019113204779528683Dickeya dadantii 3937 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
CU928145:39834323983432403268849257Escherichia coli 55989 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
CU928160:37090813709081373009921019Escherichia coli IAI1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008711:3701635*3701635372498023346Arthrobacter aurescens TC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009778:29512072951207297908827882Enterobacter sakazakii ATCC BAA-894, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011748:39834323983432403268849257Escherichia coli 55989, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013222:3060482*3060482308509924618Robiginitalea biformata HTCC2501, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020126:8885518*8885518890611620599Myxococcus stipitatus DSM 14675, complete genome1e-0869.9BLASTN svgBLASTP svg
AC_000091:4472000*4472000449474322744Escherichia coli W3110 DNA, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_000913:4462782*4462782448642323642Escherichia coli K12, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010473:4564590*4564590458823123642Escherichia coli str. K-12 substr. DH10B, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015711:3546500*3546500357174025241Myxococcus fulvus HW-1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006087:345976*34597640567959704Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007606:12091321209132122967220541Shigella dysenteriae Sd197, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008686:405159*40515944047735319Paracoccus denitrificans PD1222 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010498:4821519*4821519484497023452Escherichia coli SMS-3-5, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012917:1840172*1840172189159251421Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013093:832971*83297185669123721Actinosynnema mirum DSM 43827, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013174:309943*30994334995340011Jonesia denitrificans DSM 20603, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928145:3608917*3608917363276823852Escherichia coli 55989 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004337:36219853621985364626824284Shigella flexneri 2a str. 301, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004741:41320564132056415578223727Shigella flexneri 2a str. 2457T, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011748:3608917*3608917363276823852Escherichia coli 55989, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013199:2058857*2058857209031631460Lactobacillus rhamnosus Lc 705, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_021177:54196205419620544465625037Streptomyces fulvissimus DSM 40593, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004337:20987362098736212859929864Shigella flexneri 2a str. 301, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928160:16688421668842169164522804Escherichia coli IAI1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002516:2305659*2305659232825322595Escherichia coli KO11, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002516:18464921846492187615129660Escherichia coli KO11, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002185:22337322233732226508731356Escherichia coli W, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002185:17708151770815179359922785Escherichia coli W, complete genome3e-0661.9BLASTN svgBLASTP svg
AP010958:25040722504072253559331522Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007948:4558000*4558000461212254123Polaromonas sp. JS666, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013198:2088780*2088780211935230573Lactobacillus rhamnosus GG, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012526:157000*15700017910522106Deinococcus deserti VCD115, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011751:23958822395882242503029149Escherichia coli UMN026 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011751:18596061859606188482925224Escherichia coli UMN026 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011750:15650001565000158659921600Escherichia coli IAI39 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010468:2265423*2265423228519619774Escherichia coli ATCC 8739, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009801:17566101756610177871522106Escherichia coli E24377A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008570:2014151*2014151204014925999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome3e-0661.9BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg