Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:3780000 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
378013337807145823-methyl-adenine DNA glycosylase I constitutiveQuickGO ontologyBLASTP
37806923781132441putative acetyltransferaseQuickGO ontologyBLASTP
378110137834342334biotin sulfoxide reductaseQuickGO ontologyBLASTP
37835873784249663putative outer membrane lipoproteinQuickGO ontologyBLASTP
378446837854429752-hydroxyacid dehydrogenaseQuickGO ontologyBLASTP
37854923786202711putative outer membrane lipoproteinQuickGO ontologyBLASTP
37866413786931291putative transcriptional regulatorQuickGO ontologyBLASTP
37872193787431213Cold shock protein cspA CSP-AQuickGO ontologyBLASTP
37876053788144540putative periplasmic or exported proteinQuickGO ontologyBLASTP
37883963788797402putative cytoplasmic proteinQuickGO ontologyBLASTP
37889683789651684putative integrase proteinQuickGO ontologyBLASTP
37898303790315486putative acetyltransferaseQuickGO ontologyBLASTP
37903033790590288putative cytoplasmic proteinQuickGO ontologyBLASTP
37907683791235468putative acetyltransferaseQuickGO ontologyBLASTP
37914073791598192Putative transposase insK for insertion sequence eQuickGO ontologyBLASTP
379203137932391209transposase of Tn10QuickGO ontologyBLASTP
379340837954772070glycyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
37954873796398912glycyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
37965373796839303putative outer membrane lipoproteinQuickGO ontologyBLASTP
37970053798000996putative inner membrane proteinQuickGO ontologyBLASTP
37980233798376354putative inner membrane proteinQuickGO ontology
379855138000051455xylulokinaseQuickGO ontologyBLASTP
380010538014271323xylose isomeraseQuickGO ontologyBLASTP
380179038029681179xylose operon regulatory protein AraCXylS familyQuickGO ontologyBLASTP