Pre_GI Gene

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Host: NC_008146 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:5106775 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
510677551092252451glycosyl transferase family 51QuickGO ontologyBLASTP
51092735110256984metallophosphoesteraseQuickGO ontologyBLASTP
511026451113701107Pyridoxal-5-phosphate-dependent enzyme beta subunitQuickGO ontologyBLASTP
511163051129311302phage integraseQuickGO ontologyBLASTP
5111635511170874tRNA-ProQuickGO ontology
51130985113295198hypothetical proteinBLASTP
511343051150071578putative ATP-binding proteinQuickGO ontologyBLASTP
51157195115961243hypothetical proteinBLASTP
511628351186252343hypothetical proteinBLASTP
51186255119062438hypothetical proteinBLASTP
51191475119443297hypothetical proteinBLASTP
51197385120607870hypothetical proteinBLASTP
51207605121023264hypothetical proteinBLASTP
51216995122412714transcriptional regulator TetR familyQuickGO ontologyBLASTP
51225175123026510thioesterase superfamilyQuickGO ontologyBLASTP
51230235123694672transcriptional regulator TetR familyQuickGO ontologyBLASTP
51237705124198429hypothetical proteinBLASTP
512429251273603069MMPLQuickGO ontologyBLASTP
512806651301082043hypothetical proteinBLASTP
51303935130872480hypothetical proteinBLASTP