Pre_GI: BLASTP Hits

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Query: NC_011283:4438500:4454736 Klebsiella pneumoniae 342 chromosome, complete genome

Start: 4454736, End: 4454942, Length: 207

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Klebsiella pneumoniae 342 was isolated from the stem tissue of Zea mays. This strain fixes atmospheric nitrogen and may be able to provide nitrogen, in the form of ammonia, to plant cells. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013008:3525428:355770135577013557907207Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA binding protein9e-27118
NC_002695:3468873:349874034987403498946207Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA binding protein9e-27118
NC_002655:3538656:356603035660303566236207Escherichia coli O157:H7 EDL933, complete genomeputative DNA binding protein9e-27118
NC_013941:3300000:333647233364723336720249Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA binding protein2e-26117
NC_010067:191190:199577199577199783207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-23106
NC_011094:2791719:281336128133612813570210Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-22104
NC_009436:3117661:314615831461583146364207Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA2e-22104
CU928160:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein4e-22103
NC_011741:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein4e-22103
NC_008800:1090000:109849810984981098698201Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-1995.1
NC_012917:1840172:185006018500601850278219Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA3e-1994
NC_013421:1819036:184891018489101849116207Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA3e-1993.6
NC_011745:3245000:326245132624513262654204Escherichia coli ED1a chromosome, complete genomeputative regulatory protein from prophage (AlpA family)3e-1890.9
NC_011149:1987291:201618320161832016401219Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein4e-1890.1
NC_011205:2180598:221304722130472213265219Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-1890.1
NC_011274:2044000:207716020771602077378219Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phage regulatory protein4e-1890.1
NC_011294:2053991:208603220860322086250219Salmonella enterica subsp. enterica serovar Enteritidis strphage regulatory protein4e-1890.1
NC_016831:947281:957204957204957422219Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage regulatory protein4e-1890.1
NC_011094:638552:652744652744652941198Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein9e-1889
NC_011745:2209288:226533522653352265553219Escherichia coli ED1a chromosome, complete genomeputative DNA binding protein from phage origin6e-1786.3
NC_016832:948029:957798957798958013216Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-1682.8
NC_014500:3744705:376114837611483761351204Dickeya dadantii 3937 chromosome, complete genomeputative regulatory protein6e-1579.3
NC_013892:1272448:129876412987641298970207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage1e-1478.6
NC_013892:3278647:328257832825783282784207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage6e-1476.3
NC_010694:2716348:273867627386762738873198Erwinia tasmaniensis, complete genomePutative hypothetical protein (prophage CP4-57 regulatory protein)8e-1475.9
NC_013716:2139952:216269121626912162930240Citrobacter rodentium ICC168, complete genomehypothetical protein3e-1373.6
NC_008253:1938975:196845019684501968668219Escherichia coli 536, complete genomeputative regulatory protein1e-1272
NC_012912:4194821:419819641981964198399204Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA2e-1167.8
NC_013592:4295449:430099243009924301195204Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA2e-1167.8
NC_014500:443874:459413459413459616204Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein2e-1167.8
NC_012880:4117376:412043941204394120642204Dickeya dadantii Ech703, complete genomephage transcriptional regulator, AlpA2e-1167.8
NC_005139:2201820:227257322725732272794222Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator9e-1062.4
NC_008150:650899:655055655055655255201Yersinia pestis Antiqua, complete genometranscriptional regulator9e-1062.4
NC_005810:1130251:114441011444101144610201Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator9e-1062.4
NC_010159:1417993:142247114224711422671201Yersinia pestis Angola, complete genometranscriptional regulator, AlpA family9e-1062.4
NC_008149:3251196:326535532653553265555201Yersinia pestis Nepal516, complete genometranscriptional regulator9e-1062.4
NC_009381:2939782:295394029539402954140201Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator9e-1062.4
NC_017168:4155143:416033541603354160535201Yersinia pestis A1122 chromosome, complete genomeAlpA family transcriptional regulator9e-1062.4
NC_017265:1136000:113964911396491139849201Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,DNA-binding protein9e-1062.4
NC_015379:908904:935089935089935310222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, AlpA family8e-1062.4
NC_016445:1363831:140720214072021407378177Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional regulator2e-0961.2
NC_017270:1755552:177452717745271774703177Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator2e-0961.2
NC_017270:1755552:178876517887651788965201Vibrio cholerae LMA3984-4 chromosome chromosome I, completetranscriptional regulator, AlpA like protein2e-0961.2
NC_002505:1931750:193580119358011936007207Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator2e-0960.8
NC_009457:1444449:148890414889041489110207Vibrio cholerae O395 chromosome 2, complete sequencetranscriptional regulator2e-0960.8
NC_012578:1838470:188293418829341883140207Vibrio cholerae M66-2 chromosome I, complete sequencetranscriptional regulator2e-0960.8
NC_012582:2013515:202032320203232020529207Vibrio cholerae O395 chromosome chromosome I, complete sequencetranscriptional regulator2e-0960.8
NC_012668:1688500:171150017115001711706207Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator2e-0960.8
NC_016944:1978058:198210919821091982315207Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator2e-0960.8
NC_012731:600518:627192627192627392201Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-0960.5
NC_009648:5119271:514087751408775141077201Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-0960.5
NC_012668:1688500:169464616946461694876231Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-0960.5
NC_010322:5293652:531510753151075315289183Pseudomonas putida GB-1 chromosome, complete genomephage transcriptional regulator AlpA6e-0959.7
NC_007722:2993852:299950229995022999717216Erythrobacter litoralis HTCC2594, complete genomehypothetical protein6e-0959.7
NC_009792:3225965:324232932423293242529201Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-0959.3
NC_009439:1297851:130657513065751306763189Pseudomonas mendocina ymp, complete genomephage transcriptional regulator, AlpA1e-0858.5
NC_012691:2614603:262271626227162622955240Tolumonas auensis DSM 9187, complete genomephage transcriptional regulator, AlpA1e-0858.5
NC_005139:796546:813042813042813236195Vibrio vulnificus YJ016 chromosome I, complete sequencepredicted transcriptional regulator1e-0858.2
NC_010170:1324758:135213513521351352347213Bordetella petrii, complete genomeputative transcriptional regulator (phage-related)2e-0857.4
NC_015379:2417312:246348524634852463706222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, AlpA family2e-0857.4
NC_010688:2781624:279949727994972799718222Xanthomonas campestris pv. campestris, complete genomephage-related regulatory protein3e-0857
NC_007086:2477040:248606124860612486282222Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-0857
NC_009138:1974935:198388419838841984096213Herminiimonas arsenicoxydans, complete genomeputative CP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage4e-0857
NC_018691:3525430:356425235642523564566315Alcanivorax dieselolei B5 chromosome, complete genomePhage transcriptional regulator, AlpA4e-0857
NC_008782:1510000:151461215146121514824213Acidovorax sp. JS42, complete genomephage transcriptional regulator, AlpA4e-0857
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA7e-0855.8
NC_004547:1873390:188101818810181881212195Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative prophage regulatory protein1e-0755.5
NC_008321:1993541:201135520113552011549195Shewanella sp. MR-4, complete genomephage transcriptional regulator, AlpA1e-0755.5
NC_008344:49039:121606121606121818213Nitrosomonas eutropha C91, complete genomephage transcriptional regulator, AlpA9e-0855.5
NC_016944:514742:530410530410530610201Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional regulator1e-0755.1
NC_012668:83641:897378973789937201Vibrio cholerae MJ-1236 chromosome 1, complete sequencetranscriptional regulator1e-0755.1
NC_002505:514732:530402530402530602201Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator1e-0755.1
NC_014972:247028:265810265810266025216Desulfobulbus propionicus DSM 2032 chromosome, complete genomephage transcriptional regulator, AlpA1e-0755.1
NC_012912:1701231:171525317152531715447195Dickeya zeae Ech1591, complete genomephage transcriptional regulator, AlpA2e-0754.7
NC_013421:1819036:184166718416671841861195Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA3e-0753.9
NC_021150:1677811:168637216863721686659288Azotobacter vinelandii CA6, complete genomeProphage CP4-57 regulatory, AlpA-like protein3e-0753.9
NC_012560:1677798:168635916863591686646288Azotobacter vinelandii DJ, complete genomeProphage CP4-57 regulatory, AlpA-like protein3e-0753.9
NC_015424:3520783:355680435568043556980177Aeromonas veronii B565 chromosome, complete genomeputative transcriptional regulator3e-0753.9
NC_011750:4390000:439414243941424394378237Escherichia coli IAI39 chromosome, complete genomeputative phage regulatory protein4e-0753.5
NC_011748:4950723:496570849657084965944237Escherichia coli 55989, complete genomeconserved hypothetical protein; putative phage regulatory protein4e-0753.5
CU928145:4950723:496570849657084965944237Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative phage regulatory protein4e-0753.5
NC_004431:4319152:432964443296444329877234Escherichia coli CFT073, complete genomehypothetical protein4e-0753.5
NC_010498:4856011:487603348760334876266234Escherichia coli SMS-3-5, complete genomeAlpA family transcriptional regulator4e-0753.5
NC_008253:3941938:397542639754263975659234Escherichia coli 536, complete genomeputative regulatory protein4e-0753.5
NC_011745:3405520:341461934146193414852234Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-0753.5
NC_013592:2968500:299374929937492993943195Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA6e-0753.1
NC_009901:1516340:153082715308271531030204Shewanella pealeana ATCC 700345, complete genomephage transcriptional regulator, AlpA5e-0753.1
NC_014500:3097362:314293231429323143126195Dickeya dadantii 3937 chromosome, complete genomeDNA-binding protein5e-0753.1
NC_004578:3849835:386503638650363865278243Pseudomonas syringae pv. tomato str. DC3000, complete genomeDNA-binding protein, putative5e-0753.1
NC_010634:1916000:191718019171801917365186Yersinia pseudotuberculosis PB1/+, complete genomephage transcriptional regulator, AlpA8e-0752.8
NC_009381:1362471:139729913972991397484186Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulator8e-0752.8
NC_012731:3411161:342822134282213428406186Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative transcriptional regulator8e-0752.8
NC_009256:458649:463834463834464040207Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage transcriptional regulator AlpA7e-0752.8
NC_017047:2079368:208454920845492084743195Rahnella aquatilis HX2 chromosome, complete genomeputative prophage regulatory protein7e-0752.8
NC_020211:996497:100966210096621009928267Serratia marcescens WW4, complete genomehypothetical protein9e-0752.4
NC_016818:1795576:183513518351351835329195Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator1e-0652
NC_003295:998000:101150510115051011771267Ralstonia solanacearum GMI1000, complete genomePUTATIVE BACTERIOPHAGE DNA-BINDING TRANSCRIPTION REGULATOR PROTEIN1e-0652
NC_011283:1811000:185314418531441853353210Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family1e-0652
NC_003143:2137945:213871521387152138996282Yersinia pestis CO92, complete genomeputative transcriptional regulator1e-0652
NC_008150:1420825:142179414217941422075282Yersinia pestis Antiqua, complete genomehypothetical protein1e-0652
NC_005810:1794490:179545917954591795740282Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator1e-0652
NC_015731:1578106:159965415996541599836183Nitrosomonas sp. Is79A3 chromosome, complete genomephage transcriptional regulator AlpA1e-0652
NC_012917:833721:838409838409838669261Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA2e-0651.2
NC_009092:1441813:145459814545981454783186Shewanella loihica PV-4, complete genomephage transcriptional regulator, AlpA2e-0651.2
NC_012660:2143376:215198521519852152215231Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage-like protein2e-0651.2
NC_015663:549425:570501570501570707207Enterobacter aerogenes KCTC 2190 chromosome, complete genomephage transcriptional regulator AlpA3e-0650.4
NC_015422:2806832:282494928249492825182234Alicycliphilus denitrificans K601 chromosome, complete genomephage transcriptional regulator AlpA3e-0650.4
NC_016830:3869572:394020739402073940377171Pseudomonas fluorescens F113 chromosome, complete genometranscriptional regulator in PFGI-1-like cluster3e-0650.4
NC_011083:4547825:458032145803214580494174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, AlpA family3e-0650.4
NC_010465:3431500:343247334324733432679207Yersinia pseudotuberculosis YPIII, complete genomephage transcriptional regulator, AlpA3e-0650.4
NC_011750:4775770:478416447841644784337174Escherichia coli IAI39 chromosome, complete genomehypothetical protein3e-0650.4
NC_017075:3165858:318963331896333189848216Rubrivivax gelatinosus IL144, complete genomeputative AlpA family transcriptional regulator3e-0650.4
NC_017506:1100679:111453411145341114761228Marinobacter adhaerens HP15 chromosome, complete genomeprophage CP4-57 regulatory3e-0650.4
NC_009708:915814:921909921909922118210Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeAlpA family protein4e-0650.1
NC_020829:5174354:518228151822815182514234Pseudomonas denitrificans ATCC 13867, complete genomeDNA-binding protein4e-0650.1
NC_016612:2009927:204035620403562040562207Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative regulatory protein5e-0650.1
NC_011740:2859933:286231628623162862525210Escherichia fergusonii ATCC 35469, complete genomeputative regulatory protein6e-0649.7
NC_007925:138927:166679166679166894216Rhodopseudomonas palustris BisB18, complete genomephage transcriptional regulator, AlpA8e-0648.9