Pre_GI: BLASTP Hits

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Query: NC_009952:3596399:3603596 Dinoroseobacter shibae DFL 12, complete genome

Start: 3603596, End: 3604171, Length: 576

Host Lineage: Dinoroseobacter shibae; Dinoroseobacter; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This aerobic anoxygenic phototroph was isolated from cultivated marine dinoflagellates originally from the Bay of Tokyo, Japan. Liquid cultures grown in the dark are distinctly pink, while colonies on complex agar media are dark red.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:165559:186028186028186600573Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor5e-1890.9
NC_007509:71954:736517365174262612Burkholderia sp. 383 chromosome 3, complete sequencesigma-24 (FecI-like)4e-1787.8
NC_004129:195347:212505212505213086582Pseudomonas fluorescens Pf-5, complete genomeRNA polymerase sigma-70 factor8e-1786.7
NC_010678:642769:664204664204664836633Ralstonia pickettii 12J chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily2e-1582
NC_014532:1307983:133179013317901332392603Halomonas elongata DSM 2581, complete genomeK03088 RNA polymerase sigma-70 factor, ECF subfamily4e-1580.9
NC_016906:1458158:147173414717341472315582Gordonia polyisoprenivorans VH2 chromosome, complete genomesigma-70 family RNA polymerase sigma factor7e-1580.5
NC_012225:1657248:166270016627001663245546Brachyspira hyodysenteriae WA1, complete genomeR polymerase sigma-70 factor 29e-1580.1
NC_007963:1190847:124467112446711245285615Chromohalobacter salexigens DSM 3043, complete genomesigma-24 (FecI-like)8e-1580.1
NC_014355:3669470:367093436709343671530597Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma factor SigK (Sigma-K)7e-1580.1
NC_013446:2237854:225325022532502253825576Comamonas testosteroni CNB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1479.7
NC_017243:424132:440723440723441268546Brachyspira intermedia PWS/A chromosome, complete genomeR polymerase sigma-70 factor 21e-1479.3
NC_008536:3160540:318629731862973186758462Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1479.3
NC_013722:1689125:169112716911271691711585Xanthomonas albilineans, complete genomeprobable rna polymerase sigma-e factor protein2e-1479
NC_011961:304158:307073307073307639567Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily5e-1373.9
NC_019673:3041936:304282330428233043461639Saccharothrix espanaensis DSM 44229 complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-1373.6
NC_013929:5135285:515159451515945152304711Streptomyces scabiei 87.22 chromosome, complete genomesigma factor9e-1373.2
NC_003155:5253923:527524952752495275962714Streptomyces avermitilis MA-4680, complete genomeRNA polymerase sigma-70 factor1e-1273.2
NC_014931:1642179:165110916511091651702594Variovorax paradoxus EPS chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1272.8
NC_011886:1891077:190513119051311905970840Arthrobacter chlorophenolicus A6, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1272.8
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU2e-1272
NC_003888:4251867:428257742825774283287711Streptomyces coelicolor A3(2), complete genomeRNA polymerase sigma-70 factor2e-1272
NC_009921:4757148:477616347761634776723561Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1271.6
NC_013093:2230171:223517522351752235852678Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1271.6
NC_014171:1018338:103091910309191031539621Bacillus thuringiensis BMB171 chromosome, complete genomeRNA polymerase ECF-type sigma factor4e-1271.2
NC_017986:5467279:548737254873725487980609Pseudomonas putida ND6 chromosome, complete genomeRNA polymerase sigma factor4e-1271.2
NC_010475:2188827:218983121898312190430600Synechococcus sp. PCC 7002, complete genometranscription initiation factor sigma E8e-1270.1
NC_011725:1032500:104531410453141045847534Bacillus cereus B4264 chromosome, complete genomeRNA polymerase factor sigma C1e-1169.7
NC_017273:352150:380081380081380596516Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completeECF subfamily RNA polymerase sigma-24 subunit1e-1169.3
NC_015914:2769042:276844027684402769051612Cyclobacterium marinum DSM 745 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-1169.3
NC_009523:379705:396061396061396654594Roseiflexus sp. RS-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-1169.3
NC_008536:2961460:296649229664922967064573Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.9
NC_009050:604950:619640619640620254615Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.9
NC_012659:2715651:273817827381782738756579Bacillus anthracis str. A0248, complete genomeRNA polymerase sigma factor3e-1168.6
NC_014915:727631:743122743122743703582Geobacillus sp. Y412MC52 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.6
NC_013411:1587689:160318016031801603761582Geobacillus sp. Y412MC61, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1168.6
NC_014206:2912945:291424629142462914827582Geobacillus sp. C56-T3 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-1168.6
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor2e-1168.6
NC_005945:2716000:273861327386132739191579Bacillus anthracis str. Sterne, complete genomeRNA polymerase sigma-70 factor3e-1168.6
NC_007760:535825:551316551316552005690Anaeromyxobacter dehalogenans 2CP-C, complete genomesigma-24 (FecI-like)3e-1168.2
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)4e-1167.8
NC_015172:1075592:107559210755921076101510Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1167.8
NC_013037:5395951:539916253991625399872711Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1167.4
NC_014311:1106871:112273411227341123375642Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor, sigma-246e-1167
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE7e-1167
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1167
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-1066.2
NC_012880:3241886:326005132600513260626576Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.9
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor2e-1065.9
NC_015172:1120000:113691711369171137477561Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.5
NC_012660:3689223:370480737048073705265459Pseudomonas fluorescens SBW25 chromosome, complete genomeputative RNA polymerase sigma factor2e-1065.1
NC_003997:2715623:273815027381502738692543Bacillus anthracis str. Ames, complete genomeRNA polymerase sigma-70 factor3e-1065.1
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor3e-1064.7
NC_014829:1376253:138816813881681388734567Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1064.3
NC_012491:4987280:499185249918524992427576Brevibacillus brevis NBRC 100599, complete genomeRNA polymerase ECF-type sigma factor5e-1063.9
NC_010170:3908500:391055939105593911074516Bordetella petrii, complete genomeRNA polymerase sigma factor6e-1063.9
NC_013730:1572889:158410515841051584656552Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-1063.9
NC_014210:5752651:575645957564595757085627Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,RNA polymerase, sigma-24 subunit, ECF subfamily7e-1063.9
NC_015061:1481500:149778814977881498369582Rahnella sp. Y9602 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1063.5
NC_017047:1434500:145073114507311451312582Rahnella aquatilis HX2 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit7e-1063.5
NC_010162:10764788:107860241078602410786647624Sorangium cellulosum 'So ce 56', complete genomeputative RNA polymerase sigma factor9e-1063.2
NC_015589:3241364:324630432463043246867564Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0962.8
NC_014829:178000:186205186205186768564Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0962.8
NC_017080:1194199:119784911978491198454606Phycisphaera mikurensis NBRC 102666, complete genomeRNA polymerase ECF-type sigma factor1e-0962.8
NC_012214:1117325:114286111428611143436576Erwinia pyrifoliae Ep1/96, complete genomeRNA polymerase sigma E1e-0962.8
NC_009012:3224000:322403932240393224593555Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962.4
NC_010552:58294:958139581396517705Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962
NC_009925:1184442:118898911889891189603615Acaryochloris marina MBIC11017, complete genomeRNA polymerase sigma-24 subunit2e-0962
NC_008391:2045348:206876820687682069472705Burkholderia cepacia AMMD chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily3e-0961.6
NC_012982:711122:746813746813747382570Hirschia baltica ATCC 49814, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0961.6
NC_015703:5272193:529904352990435299582540Runella slithyformis DSM 19594 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0961.2
NC_012912:1200000:122636512263651226940576Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0961.2
NC_017955:2327500:232853923285392329084546Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-0960.8
NC_011772:1011220:102153510215351022068534Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily5e-0960.8
NC_010002:4175809:418865341886534189231579Delftia acidovorans SPH-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0960.8
NC_009921:6447151:645661164566116457444834Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0960.8
NC_016906:4123000:413998141399814140532552Gordonia polyisoprenivorans VH2 chromosome, complete genomeRNA polymerase sigma factor7e-0960.5
NC_016627:762000:776639776639777193555Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor7e-0960.5
NC_014330:1957725:196524019652401965806567Brachyspira pilosicoli 95/1000 chromosome, complete genomeRNA polymerase sigma-24 subunit7e-0960.5
NC_019908:1296870:130311113031111303680570Brachyspira pilosicoli P43/6/78 chromosome, complete genomeRNA polymerase sigma-24 subunit6e-0960.5
NC_013440:1727134:174839817483981749084687Haliangium ochraceum DSM 14365, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0960.1
NC_003450:788000:804408804408805028621Corynebacterium glutamicum ATCC 13032, complete genomeRNA polymerase sigma factor RpoE8e-0960.1
NC_009342:951761:964659964659965279621Corynebacterium glutamicum R chromosome, complete genomeRNA polymerase sigma factor RpoE8e-0960.1
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor8e-0960.1
NC_016620:24354:450414504145571531Bacteriovorax marinus SJ, complete genomeputative RNA polymerase ECF-type sigma factor8e-0960.1
NC_012673:1540000:154720815472081547783576Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.7
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0859.7
NC_016803:1646342:166923316692331669781549Desulfovibrio desulfuricans ND132 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0859.7
NC_015563:3401867:340751334075133408091579Delftia sp. Cs1-4 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-0859.7
NC_008314:1955793:196331919633191963837519Ralstonia eutropha H16 chromosome 2, complete sequenceDNA-directed RNA polymerase sigma subunit PrtI (ECF sigma factor)1e-0859.3
NC_014931:1044313:106127810612781061889612Variovorax paradoxus EPS chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.3
NC_015589:2281054:228795522879552288491537Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0859.3
NC_010184:1017000:102909510290951029628534Bacillus weihenstephanensis KBAB4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.9
NC_006274:1040836:105320610532061053739534Bacillus cereus E33L, complete genomeRNA polymerase sigma C factor2e-0858.9
NC_008600:1042477:105546210554621055995534Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily3e-0858.5
NC_005957:1037205:104952510495251050058534Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma C factor3e-0858.5
NC_016779:991298:100202010020201002553534Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor3e-0858.5
NC_009092:1684467:170170617017061702344639Shewanella loihica PV-4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_015311:720631:726166726166726678513Prevotella denticola F0289 chromosome, complete genomeSigma-70 region 22e-0858.5
NC_014033:1664500:168220716822071682704498Prevotella ruminicola 23 chromosome, complete genomeECF family RNA polymerase sigma-70 factor2e-0858.5
NC_005945:1008000:102009610200961020716621Bacillus anthracis str. Sterne, complete genomeRNA polymerase sigma C factor3e-0858.2
NC_004459:1794540:181002018100201810580561Vibrio vulnificus CMCP6 chromosome I, complete sequenceRNA polymerase sigma-70 factor3e-0858.2
NC_011772:5222917:524277052427705243297528Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily3e-0858.2
NC_019897:3810000:385687138568713857380510Thermobacillus composti KWC4 chromosome, complete genomeSigM family RNA polymerase sigma factor3e-0858.2
NC_007530:1007140:102029010202901020823534Bacillus anthracis str. 'Ames Ancestor', complete genomeRNA polymerase sigma C factor3e-0858.2
NC_003997:1007139:102029010202901020823534Bacillus anthracis str. Ames, complete genomeRNA polymerase sigma C factor3e-0858.2
NC_012659:1008028:102019010201901020723534Bacillus anthracis str. A0248, complete genomeRNA polymerase factor sigma C3e-0858.2
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857.8
NC_009659:1024201:102623410262341026812579Janthinobacterium sp. Marseille chromosome, complete genomeRNA polymerase sigma factor5e-0857.8
NC_010320:671699:672453672453672983531Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase sigma factor SigY5e-0857.8
NC_012034:1783912:178800617880061788557552Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857.8
NC_011992:1318691:131869113186911319206516Acidovorax ebreus TPSY, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0857.8
NC_015144:1576047:158985115898511590342492Weeksella virosa DSM 16922 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857.4
NC_012590:193895:211507211507212055549Corynebacterium aurimucosum ATCC 700975, complete genomeECF-family sigma factor C5e-0857.4
NC_009012:2953638:301233430123343012897564Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0857
NC_021184:3149000:315104331510433151618576Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family8e-0857
NC_018750:3481476:348147634814763482261786Streptomyces venezuelae ATCC 10712, complete genomeputative RNA polymerase ECF-subfamily sigma factor9e-0856.6
NC_018867:179975:195631195631196215585Dehalobacter sp. CF chromosome, complete genomeRNA polymerase sigma factor SigZ9e-0856.6
NC_018866:108812:128036128036128620585Dehalobacter sp. DCA chromosome, complete genomeRNA polymerase sigma factor SigZ9e-0856.6
NC_011969:1084000:109474110947411095211471Bacillus cereus Q1 chromosome, complete genomeRNA polymerase factor sigma c1e-0756.2
NC_009454:1577319:163526116352611635848588Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit1e-0756.2
NC_017208:1050414:106404110640411064574534Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase ECF-type sigma factor1e-0756.2
NC_017955:3731480:382632938263293826841513Modestobacter marinus, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0756.2
NC_017200:1157835:117323311732331173853621Bacillus thuringiensis serovar finitimus YBT-020 chromosome,RNA polymerase factor sigma C1e-0756.2
NC_014828:541874:550982550982551533552Ethanoligenens harbinense YUAN-3 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.8
NC_014150:1006000:102603910260391026611573Brachyspira murdochii DSM 12563 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.8
NC_016114:3655005:367332236733223674023702Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0755.8
NC_008595:2432184:2449223244922324504281206Mycobacterium avium 104, complete genomeRNA polymerase sigma factor, sigma-70 family protein1e-0755.8
NC_015949:1180755:118484711848471185398552Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0755.8
NC_007333:3626510:363293636329363633556621Thermobifida fusca YX, complete genomeRNA polymerase sigma-70 factor2e-0755.5
NC_021182:3409199:341352734135273414072546Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0755.5
NC_008700:2451798:247336124733612474008648Shewanella amazonensis SB2B, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_005957:5091150:510720551072055107735531Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma-70 factor2e-0755.5
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H3e-0755.1
NC_015589:2019370:202926920292692029814546Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0755.1
NC_009142:267550:269255269255269797543Saccharopolyspora erythraea NRRL 2338, complete genomeRNA polymerase sigma-70 factor, ECF family2e-0755.1
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit2e-0755.1
NC_014655:2782707:278688527868852787409525Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA polymerase, sigma subunit, ecf family4e-0754.7
NC_016609:4834378:488406148840614884942882Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0754.7
NC_009142:6199326:620408662040866204679594Saccharopolyspora erythraea NRRL 2338, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0754.7
NC_014720:1161841:117795711779571178508552Caldicellulosiruptor kronotskyensis 2002 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily4e-0754.7
NC_014657:1518721:152332215233221523873552Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily4e-0754.7
NC_011773:1050000:106249510624951063028534Bacillus cereus AH820 chromosome, complete genomeRNA polymerase factor sigma C3e-0754.7
NC_014335:5038601:505489950548995055426528Bacillus cereus biovar anthracis str. CI chromosome, completeRNA polymerase sigma-70 factor3e-0754.7
NC_010172:1522707:154378715437871544350564Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family3e-0754.7
NC_018679:2211000:223032922303292230931603Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeECF subfamily RNA polymerase sigma-24 factor5e-0754.3
NC_013166:1149760:116568711656871166253567Kangiella koreensis DSM 16069, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0754.3
NC_014721:1777644:178173617817361782287552Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily5e-0754.3
NC_011969:5063283:507947350794735080006534Bacillus cereus Q1 chromosome, complete genomeRNA polymerase sigma factor5e-0754.3
NC_006274:5155395:517165151716515172184534Bacillus cereus E33L, complete genomeRNA polymerase sigma-70 factor7e-0753.9
NC_017243:685783:693812693812694471660Brachyspira intermedia PWS/A chromosome, complete genomeRpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma247e-0753.9
NC_017208:5339331:535609453560945356621528Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase sigma factor6e-0753.9
NC_014614:2500301:250120025012002501682483Clostridium sticklandii, complete genomeSigV6e-0753.9
NC_011773:5144990:516152451615245162051528Bacillus cereus AH820 chromosome, complete genomeRNA polymerase sigma factor6e-0753.9
NC_013132:2523780:254108925410892541700612Chitinophaga pinensis DSM 2588, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0753.5
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily8e-0753.5
NC_016641:1530905:153090515309051531426522Paenibacillus terrae HPL-003 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor1e-0653.1
NC_007951:2206263:220626322062632207000738Burkholderia xenovorans LB400 chromosome 1, complete sequenceSigma-24 (FecI)9e-0753.1
NC_014328:3294086:329497232949723295487516Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma-E factor2e-0652.8
NC_014392:969498:100562310056231006174552Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.8
NC_015966:1145974:116775911677591168322564Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0652.8
NC_016802:221343:238193238193238759567Corynebacterium diphtheriae HC02 chromosome, complete genomeECF-family sigma factor C1e-0652.8
NC_008600:5113765:512978451297845130407624Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0652.8
NC_016783:201066:218683218683219249567Corynebacterium diphtheriae INCA 402 chromosome, complete genomeECF-family sigma factor C1e-0652.8
NC_016799:267310:284174284174284740567Corynebacterium diphtheriae 31A chromosome, complete genomeECF family sigma factor C1e-0652.8
NC_013093:5653093:565618956561895656740552Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.8
NC_014148:3368519:337293333729333373580648Planctomyces limnophilus DSM 3776 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0652.8
NC_015953:3684065:370288037028803703584705Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0652.8
NC_019897:2004050:203094520309452031553609Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0652.8
NC_012472:5126186:514219551421955142722528Bacillus cereus 03BB102, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-0652.4
NC_016779:5079460:509547950954795096006528Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor2e-0652.4
NC_018665:139646:154042154042154605564Exiguobacterium antarcticum B7 chromosome, complete genomeRNA polymerase sigma factor SigW3e-0652
NC_008554:1623041:164580616458061646414609Syntrophobacter fumaroxidans MPOB, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0652
NC_011830:3369282:338259733825973383103507Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_020133:3787844:380841538084153809068654Mycobacterium liflandii 128FXT, complete genomealternative RNA polymerase sigma factor2e-0652
NC_012778:2049694:206882820688282069400573Eubacterium eligens ATCC 27750, complete genomeRNA polymerase sigma-70 factor, ECF subfamily2e-0652
NC_014666:4419693:4438717443871744400121296Frankia sp. EuI1c chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_016616:2219486:222386922238692224462594Dechlorosoma suillum PS chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0652
NC_004557:558500:573257573257573847591Clostridium tetani E88, complete genomeRNA polymerase sigma-70 factor2e-0652
NC_013595:8553904:857219585721958572755561Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_009076:75535:782997829978814516Burkholderia pseudomallei 1106a chromosome I, complete sequenceRNA polymerase sigma factor, sigma-70 family2e-0652
NC_012483:1408500:143868014386801439267588Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0652
NC_014910:2015627:201649420164942017018525Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family3e-0651.6
NC_007651:72952:757787577876293516Burkholderia thailandensis E264 chromosome I, complete sequenceRNA polymerase sigma-70 factor, ECF subfamily3e-0651.6
NC_010556:141374:154091154091154654564Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_012796:1645856:164776616477661648332567Desulfovibrio magneticus RS-1, complete genomeRNA polymerase ECF-type sigma factor3e-0651.6
NC_014652:1032711:107042510704251070976552Caldicellulosiruptor hydrothermalis 108 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily3e-0651.6
NC_016627:4323370:436892043689204369462543Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0651.6
NC_011898:426951:428407428407428976570Clostridium cellulolyticum H10, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.6
NC_008542:2631138:264774226477422648323582Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.2
NC_012581:5085915:510147551014755102002528Bacillus anthracis str. CDC 684 chromosome, complete genomeRNA polymerase sigma factor4e-0651.2
NC_011916:2967624:299003329900332990593561Caulobacter crescentus NA1000 chromosome, complete genomeRNA polymerase sigma factor4e-0651.2
NC_002696:2941644:296405329640532964613561Caulobacter crescentus CB15, complete genomeRNA polymerase sigma-70 factor4e-0651.2
NC_013730:2490000:249877424987742499262489Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.8
NC_008278:5855401:588728958872895887882594Frankia alni ACN14a, complete genomePutative RNA polymerase ECF-subfamily sigma factor5e-0650.8
NC_012491:5914500:591721659172165917788573Brevibacillus brevis NBRC 100599, complete genomeRNA polymerase ECF-type sigma factor7e-0650.4
NC_010723:1133163:113316311331631133726564Clostridium botulinum E3 str. Alaska E43, complete genomeRNA polymerase sigma-70 factor, family7e-0650.4
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW9e-0650.1
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W9e-0650.1
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W9e-0650.1
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW9e-0650.1
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor9e-0650.1
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW9e-0650.1
NC_013037:2231006:224359722435972244193597Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0650.1
NC_015172:1429266:144744914474491448018570Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0650.1
NC_014932:1232346:130281113028111303365555Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma factor, ecr subfamily8e-0650.1
NC_015064:2341152:236514523651452365786642Acidobacterium sp. MP5ACTX9 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0650.1
NC_016609:4152977:416982841698284170394567Niastella koreensis GR20-10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit8e-0650.1
NC_007907:2306561:230812823081282308652525Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0549.7