Pre_GI Gene

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Host: NC_013440 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013440:1727134 Haliangium ochraceum DSM 14365, complete genome

Host Lineage: Haliangium ochraceum; Haliangium; Kofleriaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Isolation: Seaweed collected from coastal sands from Japan; Temp: Mesophile; Temp: 30C; Habitat: Coastal, Marine, Sand. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. Haliangium ochraceum is a true marine organism requiring 1-3% NaCl for growth.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
172713417342977164YD repeat proteinQuickGO ontologyBLASTP
17347771735178402hypothetical protein
173586517395423678amino acid adenylation domain proteinQuickGO ontologyBLASTP
173964417407441101CRISPR-associated RAMP protein Cmr6 familyQuickGO ontologyBLASTP
17407411741247507CRISPR-associated protein Cmr5 familyQuickGO ontologyBLASTP
17412441742227984CRISPR-associated RAMP protein Cmr4 familyQuickGO ontologyBLASTP
174224117434161176CRISPR-associated protein Cmr3QuickGO ontologyBLASTP
174341317453651953CRISPR-associated protein Crm2 familyQuickGO ontologyBLASTP
174536217466901329CRISPR-associated RAMP protein Cmr1 familyQuickGO ontologyBLASTP
174681917483841566hypothetical proteinBLASTP
17483981749084687RNA polymerase sigma-24 subunit ECF subfamilyQuickGO ontologyBLASTP
17491621749605444hypothetical protein
174974117527523012serinethreonine protein kinaseQuickGO ontologyBLASTP