Pre_GI: BLASTP Hits

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Query: NC_013410:3685588:3696264 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 3696264, End: 3697151, Length: 888

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005125:2393701:239370123937012394681981Gloeobacter violaceus PCC 7421, complete genomehypothetical protein7e-54211
NC_011566:3994239:401385340138534014737885Shewanella piezotolerans WP3, complete genomeFe-S oxidoreductase, putative2e-52206
NC_009632:1927372:194317119431711944124954Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein3e-52205
NC_009487:1925645:194329719432971944250954Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein3e-52205
NC_002745:1804000:182017518201751821128954Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein3e-52205
NC_007622:1751500:176698117669811767934954Staphylococcus aureus RF122, complete genomehypothetical protein3e-52205
NC_010079:1871915:188987318898731890826954Staphylococcus aureus subsp. aureus USA300_TCH1516, completehypothetical protein3e-52205
NC_002951:1848684:186681218668121867765954Staphylococcus aureus subsp. aureus COL, complete genomehypothetical protein3e-52205
NC_003923:1841500:185798218579821858935954Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein3e-52205
NC_007793:1871165:188912318891231890076954Staphylococcus aureus subsp. aureus USA300, complete genomehypothetical protein3e-52205
NC_002758:1880323:189796918979691898922954Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to Fe-S oxidoreductase3e-52205
NC_007795:1774725:179281417928141793767954Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein3e-52205
NC_009782:1881722:189936818993681900321954Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein3e-52205
NC_002953:1819411:183731818373181838271954Staphylococcus aureus subsp. aureus MSSA476, complete genomehypothetical protein3e-52205
NC_009641:1833000:184965318496531850606954Staphylococcus aureus subsp. aureus str. Newman chromosome,hypothetical protein3e-52205
NC_013450:1825010:184277618427761843729954Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein3e-52205
NC_007168:1167454:116745411674541168413960Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-52205
NC_002976:1361364:138146813814681382421954Staphylococcus epidermidis RP62A, complete genomehypothetical protein2e-52205
NC_004461:1465397:148550114855011486454954Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein2e-52205
NC_017342:1462297:146229714622971463250954Staphylococcus aureus subsp. aureus TCH60 chromosome, completeradical SAM protein3e-52205
NC_002952:1917999:193541919354191936372954Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein3e-52205
NC_017351:1869287:188670018867001887653954Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeradical SAM superfamily protein3e-52205
NC_017347:1852500:186904818690481870001954Staphylococcus aureus subsp. aureus T0131 chromosome, completeradical SAM protein3e-52205
NC_017343:1748620:176638617663861767339954Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeradical SAM superfamily protein3e-52205
NC_017341:1851972:186989318698931870846954Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative Fe-S oxidoreductase3e-52205
NC_017337:1829840:184753518475351848488954Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein3e-52205
NC_016928:1843597:186147918614791862432954Staphylococcus aureus subsp. aureus M013 chromosome, completeputative Fe-S oxidoreductase3e-52205
NC_016912:1732354:175044317504431751396954Staphylococcus aureus subsp. aureus VC40 chromosome, completehypothetical protein3e-52205
NC_008750:3435495:345172334517233452652930Shewanella sp. W3-18-1, complete genomeconserved hypothetical radical SAM protein6e-52204
NC_009725:2859630:288794728879472888915969Bacillus amyloliquefaciens FZB42, complete genomeYtqA5e-52204
NC_020164:1037979:103853910385391039492954Staphylococcus warneri SG1, complete genomehypothetical protein1e-51203
NC_017338:1830790:184658918465891847542954Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative Fe-S oxidoreductase2e-51202
NC_016941:1774000:178992517899251790878954Staphylococcus aureus subsp. aureus MSHR1132, complete genomehypothetical protein3e-51202
NC_012115:1415827:143076314307631431704942Nautilia profundicola AmH, complete genomeradical SAM protein, family4e-50198
NC_006448:1451729:145981514598151460759945Streptococcus thermophilus LMG 18311, complete genomehypothetical protein5e-50197
NC_012559:2854640:287472728747272875704978Laribacter hongkongensis HLHK9, complete genomeYhcC6e-49194
NC_015424:2695847:271272727127272713656930Aeromonas veronii B565 chromosome, complete genomeRadical SAM protein, family2e-48192
NC_015291:665714:682020682020682958939Streptococcus oralis Uo5, complete genomeRadical SAM superfamily protein2e-48192
NC_015558:1485762:148658814865881487574987Streptococcus parauberis KCTC 11537 chromosome, complete genomeradical SAM superfamily protein5e-48191
NC_011184:2369662:236966223696622370603942Vibrio fischeri MJ11 chromosome I, complete sequenceradical SAM protein, family4e-45182
NC_010003:795355:812753812753813667915Petrotoga mobilis SJ95, complete genomeconserved hypothetical radical SAM protein4e-43175
NC_008570:3013263:303433530343353035270936Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeradical SAM protein, family4e-42172
NC_019978:224619:236230236230237183954Halobacteroides halobius DSM 5150, complete genomeradical SAM protein, TIGR01212 family9e-40164
NC_016791:2983349:301061430106143011558945Clostridium sp. BNL1100 chromosome, complete genomeradical SAM protein5e-40164
NC_017098:1278712:128019612801961281170975Spirochaeta africana DSM 8902 chromosome, complete genomeputative Fe-S oxidoreductase3e-35149
NC_013926:1037681:1040522104052210420661545Aciduliprofundum boonei T469 chromosome, complete genomehistone acetyltransferase, ELP3 family4e-1478.6
NC_019942:1270060:1270666127066612722101545Aciduliprofundum sp. MAR08-339, complete genomehistone acetyltransferase, ELP3 family9e-1477.8
NC_018664:1699618:1707468170746817085561089Clostridium acidurici 9a chromosome, complete genomeradical SAM domain-containing protein6e-1168.6
NC_008701:1039304:1057702105770210591111410Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein2e-1066.6
NC_014222:1264000:1283541128354112852021662Methanococcus voltae A3 chromosome, complete genomehistone acetyltransferase, ELP3 family2e-1066.2
NC_016630:864601:8771498771498782701122Filifactor alocis ATCC 35896 chromosome, complete genomeradical SAM domain protein4e-1065.9
NC_007955:2074844:2090646209064620922921647Methanococcoides burtonii DSM 6242, complete genomehistone acetyltransferase, ELP3 family6e-1065.1
NC_016627:3205333:3219130321913032202661137Clostridium clariflavum DSM 19732 chromosome, complete genomeputative oxygen-independent coproporphyrinogen III oxidase1e-0964.3
NC_014122:393856:4090414090414106451605Methanocaldococcus infernus ME chromosome, complete genomehistone acetyltransferase, ELP3 family2e-0963.5
NC_015958:1422319:1426898142689814279621065Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeRadical SAM domain-containing protein4e-0962.4
NC_005791:1504500:1526282152628215279041623Methanococcus maripaludis S2, complete genomeHistone acetyltransferase5e-0962
NC_014964:1309845:1315079131507913161431065Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRadical SAM domain-containing protein5e-0962
NC_012785:205502:2143702143702154191050Kosmotoga olearia TBF 19.5.1, complete genomeRadical SAM domain protein1e-0860.5
NC_020291:1014333:1026433102643310278361404Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomethreonylcarbamoyladenosine tRNA methylthiotransferase MtaB2e-0860.1
NC_015847:1589834:1612143161214316137651623Methanococcus maripaludis XI chromosome, complete genomehistone acetyltransferase, ELP3 family protein2e-0860.1
NC_009637:774358:7966197966197982441626Methanococcus maripaludis C7 chromosome, complete genomeELP3 family histone acetyltransferase4e-0858.9
NC_008262:1795914:1806633180663318083121680Clostridium perfringens SM101, complete genomeradical SAM domain protein6e-0858.2
NC_015164:29004:3195231952330851134Bacteroides salanitronis DSM 18170 chromosome, complete genomeoxygen-independent coproporphyrinogen III oxidase9e-0857.8
NC_020134:2193900:2209995220999522111401146Clostridium stercorarium subsp. stercorarium DSM 8532, completeoxygen-independent coproporphyrinogen-III oxidase 11e-0757.4
NC_020291:1437431:1439553143955314405811029Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeradical SAM domain-containing protein1e-0757.4
NC_008593:1704207:1709155170915517104561302Clostridium novyi NT, complete genomeMiaB-like tRNA modifying enzyme1e-0757.4
NC_010520:3204480:3210589321058932118871299Clostridium botulinum A3 str. Loch Maree, complete genomeRNA modification enzyme, MiaB family1e-0757.4
NC_008261:2524913:2541413254141325425461134Clostridium perfringens ATCC 13124, complete genomeputative oxygen-independent coproporphyrinogen III oxidase2e-0756.6
NC_009495:3138355:3144462314446231457601299Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeMiaB family RNA modification protein2e-0756.6
NC_009697:3071198:3077305307730530786031299Clostridium botulinum A str. ATCC 19397 chromosome, completeRNA modification protein2e-0756.6
NC_009698:3006500:3014227301422730155251299Clostridium botulinum A str. Hall chromosome, complete genomeRNA modification protein2e-0756.6
NC_012563:2761570:2761570276157027626611092Clostridium botulinum A2 str. Kyoto, complete genomeradical SAM domain protein3e-0756.2
NC_010516:2567911:2575273257527325763641092Clostridium botulinum B1 str. Okra, complete genomeradical SAM domain protein3e-0756.2
NC_009698:2420484:2431428243142824325191092Clostridium botulinum A str. Hall chromosome, complete genomeradical SAM domain-containing protein3e-0756.2
NC_009699:3178222:3184813318481331861111299Clostridium botulinum F str. Langeland chromosome, complete genomeRNA modification protein4e-0755.8
NC_017297:3178378:3184969318496931862671299Clostridium botulinum F str. 230613 chromosome, complete genomeMiaB family RNA modification protein4e-0755.8
NC_009495:2571732:2587061258706125881521092Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeradical SAM domain protein4e-0755.8
NC_010516:3196158:3202267320226732035651299Clostridium botulinum B1 str. Okra, complete genomeRNA modification enzyme, MiaB family4e-0755.8
NC_002570:1426000:1437457143745714388031347Bacillus halodurans C-125, complete genomehypothetical protein5e-0755.5
NC_019903:3048132:3053830305383030551941365Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,MiaB-like tRNA modifying enzyme4e-0755.5
NC_008261:2117207:2132583213258321342621680Clostridium perfringens ATCC 13124, complete genomeradical SAM domain protein6e-0755.1
NC_009376:1291901:1298128129812812993601233Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeradical SAM domain-containing protein7e-0755.1
NC_009634:887205:9091459091459107701626Methanococcus vannielii SB chromosome, complete genomeELP3 family histone acetyltransferase8e-0754.7
NC_009012:1595498:1608211160821116093531143Clostridium thermocellum ATCC 27405, complete genomeputative oxygen-independent coproporphyrinogen III oxidase1e-0654.3
NC_008261:2524913:2529867252986725311711305Clostridium perfringens ATCC 13124, complete genomeMiaB-like tRNA modifying enzyme1e-0653.9
NC_011999:1320159:1328660132866013300061347Macrococcus caseolyticus JCSC5402, complete genomehypothetical protein1e-0653.9
NC_012781:2802000:2810644281064428122361593Eubacterium rectale ATCC 33656, complete genomecoproporphyrinogen dehydrogenase1e-0653.9
NC_010718:1865992:1870498187049818718531356Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA modification enzyme, MiaB family1e-0653.9
NC_003366:1901898:1917270191727019189491680Clostridium perfringens str. 13, complete genomeMg-protoporphyrin IX monomethyl ester oxidative cyclase1e-0653.9
NC_004552:269053:2849182849182861831266Chlamydophila abortus S26/3, complete genomehypothetical protein1e-0653.9
NC_016645:985802:9879929879929892361245Pyrobaculum sp. 1860 chromosome, complete genomeradical SAM protein1e-0653.9
NC_010520:2635750:2650074265007426511651092Clostridium botulinum A3 str. Loch Maree, complete genomeradical SAM domain protein2e-0653.5
NC_014833:3444550:3465805346580534668301026Ruminococcus albus 7 chromosome, complete genomeRadical SAM domain-containing protein3e-0653.1
NC_012658:2641446:2645289264528926463801092Clostridium botulinum Ba4 str. 657 chromosome, complete genomeradical SAM domain-containing protein3e-0653.1
NC_009674:3073564:3081853308185330832051353Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeRNA modification protein3e-0653.1
NC_016627:3205333:3237211323721132387071497Clostridium clariflavum DSM 19732 chromosome, complete genomecoproporphyrinogen dehydrogenase HemZ2e-0653.1
NC_012563:3374904:3381013338101333823111299Clostridium botulinum A2 str. Kyoto, complete genomeRNA modification enzyme, MiaB family2e-0653.1
NC_003997:4116944:4122986412298641243381353Bacillus anthracis str. Ames, complete genomehypothetical protein3e-0652.8
NC_011772:4255161:4259900425990042612521353Bacillus cereus G9842, complete genomeRNA modification enzyme, MiaB family3e-0652.8
NC_005945:4116978:4123487412348741248391353Bacillus anthracis str. Sterne, complete genomehypothetical protein3e-0652.8
NC_007530:4117071:4123113412311341244651353Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein3e-0652.8
NC_014171:4178746:4183236418323641845881353Bacillus thuringiensis BMB171 chromosome, complete genomeFe-S oxidoreductase3e-0652.8
NC_014335:4027105:4033147403314740344991353Bacillus cereus biovar anthracis str. CI chromosome, completehypothetical protein3e-0652.8
NC_006274:4159096:4165140416514041664921353Bacillus cereus E33L, complete genomehypothetical protein3e-0652.8
NC_012472:4119192:4127448412744841288001353Bacillus cereus 03BB102, complete genomeRNA modification enzyme, MiaB family3e-0652.8
NC_005957:4104880:4110924411092441122761353Bacillus thuringiensis serovar konkukian str. 97-27, completehypothetical protein3e-0652.8
NC_010184:4155345:4161602416160241629541353Bacillus weihenstephanensis KBAB4, complete genomeRNA modification enzyme, MiaB family3e-0652.8
NC_004722:4244730:4249492424949242508441353Bacillus cereus ATCC 14579, complete genomeFe-S oxidoreductase3e-0652.8
NC_011725:4288309:4293067429306742944191353Bacillus cereus B4264 chromosome, complete genomehypothetical protein3e-0652.8
NC_016779:4039103:4045146404514640464981353Bacillus cereus F837/76 chromosome, complete genomeMiaB family protein, possibly involved in tRNA or rRNA modification3e-0652.8
NC_008600:4101748:4110004411000441113561353Bacillus thuringiensis str. Al Hakam, complete genomepossible 2-methylthioadenine synthetase3e-0652.8
NC_016771:4059445:4069723406972340710751353Bacillus cereus NC7401, complete genomehypothetical protein3e-0652.8
NC_011969:4001489:4011027401102740123791353Bacillus cereus Q1 chromosome, complete genomefe-s oxidoreductase3e-0652.8
NC_011658:4107501:4115939411593941172911353Bacillus cereus AH187 chromosome, complete genomeMiaB family RNA modification protein3e-0652.8
NC_003909:4064904:4071597407159740729491353Bacillus cereus ATCC 10987, complete genomehypothetical protein3e-0652.8
NC_017208:4294341:4299100429910043004521353Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeFe-S oxidoreductase3e-0652.8
NC_012659:4116971:4123013412301341243651353Bacillus anthracis str. A0248, complete genomeRNA modification enzyme, MiaB family3e-0652.8
NC_012581:4118366:4124408412440841257601353Bacillus anthracis str. CDC 684 chromosome, complete genomeMiaB family RNA modification protein3e-0652.8
NC_011773:4108855:4114898411489841162501353Bacillus cereus AH820 chromosome, complete genomeMiaB family RNA modification protein3e-0652.8
NC_009699:2635745:2635745263574526368361092Clostridium botulinum F str. Langeland chromosome, complete genomeradical SAM domain-containing protein4e-0652.4
NC_017297:2635892:2635892263589226369831092Clostridium botulinum F str. 230613 chromosome, complete genomeradical SAM domain-containing protein4e-0652.4
NC_012658:3213498:3219607321960732209051299Clostridium botulinum Ba4 str. 657 chromosome, complete genomeMiaB family RNA modification protein3e-0652.4
NC_012658:3213498:3228175322817532293171143Clostridium botulinum Ba4 str. 657 chromosome, complete genomecoproporphyrinogen III oxidase3e-0652.4
NC_009033:1042500:1059427105942710607161290Staphylothermus marinus F1, complete genomeRNA modification enzyme, MiaB family4e-0652
NC_012780:430653:4482044482044496191416Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequenceoxygen-independent coproporphyrinogen III oxidase5e-0652
NC_017297:3178378:3193485319348531946271143Clostridium botulinum F str. 230613 chromosome, complete genomeputative oxygen-independent coproporphyrinogen III oxidase5e-0652
NC_009699:3178222:3193330319333031944721143Clostridium botulinum F str. Langeland chromosome, complete genomecoproporphyrinogen III oxidase5e-0652
NC_012004:1053682:1059080105908010602101131Streptococcus uberis 0140J, complete genomeoxygen-independent coproporphyrinogen III oxidase7e-0651.6
NC_009495:3138355:3152849315284931540001152Clostridium botulinum A str. ATCC 3502 chromosome, complete genomecoproporphyrinogen III oxidase7e-0651.6
NC_009454:1577319:163109116310911631960870Pelotomaculum thermopropionicum SI, complete genomeFe-S oxidoreductase6e-0651.6
NC_008593:1704207:1717318171731817184451128Clostridium novyi NT, complete genomeoxygen-independent coproporphyrinogen III oxidase, putative6e-0651.6
NC_015873:2105847:2108664210866421097881125Megasphaera elsdenii DSM 20460, complete genomeputative oxygen-independent coproporphyrinogen III oxidase8e-0651.2
NC_009698:3006500:3022614302261430237561143Clostridium botulinum A str. Hall chromosome, complete genomecoproporphyrinogen III oxidase9e-0651.2
NC_009697:3071198:3085692308569230868341143Clostridium botulinum A str. ATCC 19397 chromosome, completecoproporphyrinogen III oxidase9e-0651.2
NC_012563:3374904:3389398338939833905401143Clostridium botulinum A2 str. Kyoto, complete genomeoxygen-independent coproporphyrinogen III oxidase9e-0651.2