Pre_GI: BLASTN Hits

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Query: NC_012660:4558122 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4558122, End: 4592341, Length: 34220

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-0663.9BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_011992:1505106*1505106152858323478Acidovorax ebreus TPSY, complete genome5e-18101BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome8e-23117BLASTN svgBLASTP svg
NC_009348:14759551475955153571059756Aeromonas salmonicida subsp. salmonicida A449, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_015183:2483653*2483653251000626354Agrobacterium sp. H13-3 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_003304:2507000*2507000253013123132Agrobacterium tumefaciens str. C58 chromosome circular, complete3e-1075.8BLASTN svgBLASTP svg
NC_003062:2506959*2506959252983722879Agrobacterium tumefaciens str. C58 chromosome circular, complete3e-1075.8BLASTN svgBLASTP svg
NC_011988:1036618*1036618106496728350Agrobacterium vitis S4 chromosome 2, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome9e-32147BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_014910:2585747*2585747260852622780Alicycliphilus denitrificans BC chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome8e-23117BLASTN svgBLASTP svg
NC_013859:9500*95003559926100Azospirillum sp. B510 plasmid pAB510e, complete sequence1e-0973.8BLASTN svgBLASTP svg
NC_021150:2026496*2026496204664620151Azotobacter vinelandii CA6, complete genome01968BLASTN svgBLASTP svg
NC_012560:2026483*2026483204663320151Azotobacter vinelandii DJ, complete genome01968BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome5e-18101BLASTN svgBLASTP svg
NC_007509:719547195411100139048Burkholderia sp. 383 chromosome 3, complete sequence2e-1489.7BLASTN svgBLASTP svg
NC_002696:1154996*1154996117718622191Caulobacter crescentus CB15, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007298:2856104*2856104289461138508Dechloromonas aromatica RCB, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015563:40244504024450405303928590Delftia sp. Cs1-4 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_012796:1049034*10490341180099131066Desulfovibrio magneticus RS-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014500:2589089*2589089260812419036Dickeya dadantii 3937 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_013592:14650151465015148872023706Dickeya dadantii Ech586, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012880:1127997*1127997115596427968Dickeya dadantii Ech703, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_012880:2425330*2425330245003424705Dickeya dadantii Ech703, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012912:2216749*2216749224082124073Dickeya zeae Ech1591, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_012779:1820244*1820244184249822255Edwardsiella ictaluri 93-146, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_020063:2011019*2011019203659925581Enterobacteriaceae bacterium strain FGI 57, complete genome5e-30141BLASTN svgBLASTP svg
NC_014394:80873480873483220323470Gallionella capsiferriformans ES-2 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010814:36739833673983369691022928Geobacter lovleyi SZ, complete genome5e-18101BLASTN svgBLASTP svg
NC_002939:30430683043068306461721550Geobacter sulfurreducens PCA, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_007645:4677965*4677965469591417950Hahella chejuensis KCTC 2396, complete genome9e-35157BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013850:2103469*2103469214696843500Klebsiella variicola At-22 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_007947:2140000*2140000218514745148Methylobacillus flagellatus KT, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_014733:12233591223359125683633478Methylovorus sp. MP688 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_016026:997225*997225103720039976Micavibrio aeruginosavorus ARL-13 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_010120:609323*60932363703227710Neisseria meningitidis 053442, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008767:613394*61339463989326500Neisseria meningitidis FAM18, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_003112:744476*74447676938624911Neisseria meningitidis MC58, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_003112:673772*67377269516421393Neisseria meningitidis MC58, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007484:1229899*1229899125251522617Nitrosococcus oceani ATCC 19707, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_014837:31265433126543315305826516Pantoea sp. At-9b chromosome, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_007498:35748435748438618028697Pelobacter carbinolicus DSM 2380, complete genome8e-20107BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008781:2981868*2981868300465822791Polaromonas naphthalenivorans CJ2, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome3e-31145BLASTN svgBLASTP svg
NC_016002:24539192453919250029546377Pseudogulbenkiania sp. NH8B, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome0773BLASTN svgBLASTP svg
NC_002516:3079850*3079850310675226903Pseudomonas aeruginosa PAO1, complete genome01752BLASTN svgBLASTP svg
NC_008463:2467219*2467219250339236174Pseudomonas aeruginosa UCBPP-PA14, complete genome01800BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-1695.6BLASTN svgBLASTP svg
NC_015379:24829012482901250376220862Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,4e-0971.9BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome0785BLASTN svgBLASTP svg
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome06179BLASTN svgBLASTP svg
NC_004129:43333024333302435159918298Pseudomonas fluorescens Pf-5, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007492:2203220*2203220222417320954Pseudomonas fluorescens PfO-1, complete genome03368BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_012660:31165003116500314096024461Pseudomonas fluorescens SBW25 chromosome, complete genome2e-69272BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_015410:3209954*3209954323120121248Pseudomonas mendocina NK-01 chromosome, complete genome01752BLASTN svgBLASTP svg
NC_009512:3618055*3618055363859920545Pseudomonas putida F1, complete genome04018BLASTN svgBLASTP svg
NC_009512:33345793334579336267428096Pseudomonas putida F1, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_002947:2809591*2809591283264923059Pseudomonas putida KT2440, complete genome03897BLASTN svgBLASTP svg
NC_015733:19767521976752200134124590Pseudomonas putida S16 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_009434:2577717*2577717259643418718Pseudomonas stutzeri A1501, complete genome01762BLASTN svgBLASTP svg
NC_015740:2407500*2407500244682739328Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete0755BLASTN svgBLASTP svg
NC_005773:21771842177184220009922916Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-31145BLASTN svgBLASTP svg
NC_007005:3414579*3414579344125226674Pseudomonas syringae pv. syringae B728a, complete genome5e-172613BLASTN svgBLASTP svg
NC_004578:38498353849835387260722773Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-31145BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_012856:3615550*3615550364899933450Ralstonia pickettii 12D chromosome 1, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007761:3564449*3564449358909924651Rhizobium etli CFN 42, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_012850:3454270*3454270347928825019Rhizobium leguminosarum bv. trifolii WSM1325, complete genome2e-23119BLASTN svgBLASTP svg
NC_008380:4078670*4078670410263623967Rhizobium leguminosarum bv. viciae 3841, complete genome5e-21111BLASTN svgBLASTP svg
NC_009049:2131017*2131017216459933583Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_012490:3094857*3094857312125526399Rhodococcus erythropolis PR4, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_011149:21795922179592220743527844Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-19105BLASTN svgBLASTP svg
NC_006905:22356072235607226436328757Salmonella enterica subsp. enterica serovar Choleraesuis str3e-19105BLASTN svgBLASTP svg
NC_011083:1408202*1408202142698618785Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-0971.9BLASTN svgBLASTP svg
NC_006511:1579776*1579776160172721952Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC4e-0971.9BLASTN svgBLASTP svg
NC_006511:79254379254382457832036Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-19105BLASTN svgBLASTP svg
NC_010102:17031721703172172512221951Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,4e-0971.9BLASTN svgBLASTP svg
NC_003198:1693623*1693623171542721805Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-0971.9BLASTN svgBLASTP svg
NC_003198:21796882179688220742827741Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-20109BLASTN svgBLASTP svg
NC_004631:1271500*1271500129345821959Salmonella enterica subsp. enterica serovar Typhi Ty2, complete4e-0971.9BLASTN svgBLASTP svg
NC_004631:79981079981083168931880Salmonella enterica subsp. enterica serovar Typhi Ty2, complete2e-20109BLASTN svgBLASTP svg
NC_003197:1401603*1401603142524123639Salmonella typhimurium LT2, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015566:1127595*1127595116557137977Serratia sp. AS12 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_015567:1127780*1127780116575637977Serratia sp. AS9 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010506:51559515155951517924523295Shewanella woodyi ATCC 51908, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010658:1772994*1772994179509922106Shigella boydii CDC 3083-94, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_013959:1723037*1723037174709924063Sideroxydans lithotrophicus ES-1 chromosome, complete genome5e-18101BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome6e-36161BLASTN svgBLASTP svg
NC_009663:2500186*2500186252039120206Sulfurovum sp. NBC37-1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_013522:736339*73633975837722039Thermanaerovibrio acidaminovorans DSM 6589, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014931:1642179*1642179167070028522Variovorax paradoxus EPS chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome6e-113416BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete1e-1593.7BLASTN svgBLASTP svg
NC_013456:2528284*2528284254628518002Vibrio sp. Ex25 chromosome 1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_005140:96026196026198150721247Vibrio vulnificus YJ016 chromosome II, complete sequence7e-0867.9BLASTN svgBLASTP svg
NC_007086:1988000*1988000201548327484Xanthomonas campestris pv. campestris str. 8004, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_003902:2903493*2903493292609922607Xanthomonas campestris pv. campestris str. ATCC 33913, complete8e-134486BLASTN svgBLASTP svg
NC_007508:27569452756945277931722373Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome3e-127464BLASTN svgBLASTP svg
NC_007705:3429493*3429493345339023898Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome3e-127464BLASTN svgBLASTP svg