Pre_GI Gene

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Host: NC_011988 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011988:1036618 Agrobacterium vitis S4 chromosome 2, complete genome

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
103661810397523135acriflavin resistance protein BQuickGO ontologyBLASTP
103979710410321236acriflavin resistance protein AQuickGO ontologyBLASTP
10412051041873669transcriptional regulator TetR familyQuickGO ontologyBLASTP
10418791042829951phosphoribosylaminoimidazole-succinocarboxamide synthaseQuickGO ontologyBLASTP
10430451043698654membrane proteinQuickGO ontologyBLASTP
1046628104670376tRNA-AlaQuickGO ontologyBLASTP
105261310537551143polysaccharide export proteinQuickGO ontologyBLASTP
10539041054809906serinethreonine protein kinaseQuickGO ontologyBLASTP
105479610562471452serinethreonine phosphoprotein phosphataseQuickGO ontologyBLASTP
105634810598423495IcmF family proteinQuickGO ontologyBLASTP
105983910613741536OmpA-type porinQuickGO ontologyBLASTP
106137110627111341hypothetical proteinBLASTP
106270110639601260forkhead-type phosphopeptide-binding proteinQuickGO ontologyBLASTP
106395710649671011hypothetical proteinBLASTP