Pre_GI Gene

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Host: NC_015410 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015410:3209954 Pseudomonas mendocina NK-01 chromosome, complete genome

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
320752832099572430conjugal transfer ATPase TrbEQuickGO ontologyBLASTP
32099543210688735conjugal transfer protein TrbJQuickGO ontologyBLASTP
32107013210886186hypothetical protein
321088332120431161conjugal transfer protein TrbLQuickGO ontologyBLASTP
32120563212763708conjugal transfer protein TrbFQuickGO ontologyBLASTP
32127603213746987P-type conjugative transfer protein TrbGQuickGO ontologyBLASTP
321374932150141266conjugation TrbI family proteinQuickGO ontologyBLASTP
32150113215244234hypothetical proteinBLASTP
32154453215615171proteic killer proteinQuickGO ontologyBLASTP
32156333215920288antitoxin proteinQuickGO ontologyBLASTP
321621932174151197hypothetical proteinBLASTP
32174153217666252XRE family transcriptional regulatorQuickGO ontologyBLASTP
321795332194431491hypothetical proteinBLASTP
321972332209221200phage integraseQuickGO ontologyBLASTP
3221020322109374tRNA-ProQuickGO ontologyBLASTP
32211663221522357MerR family transcriptional regulatorQuickGO ontologyBLASTP
32215033221781279integration host factor subunit alphaQuickGO ontologyBLASTP
322180932241872379phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
322423232252481017phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
3225345322570135750S ribosomal protein L20QuickGO ontologyBLASTP
3225731322592519550S ribosomal protein L35QuickGO ontologyBLASTP
32259863226519534translation initiation factor IF-3QuickGO ontologyBLASTP
322653732284591923threonyl-tRNA synthetaseQuickGO ontologyBLASTP
322898632302691284FAD dependent oxidoreductaseQuickGO ontologyBLASTP
32303203231201882hypothetical proteinBLASTP