Pre_GI Gene

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Host: NC_012490 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012490:3094857 Rhodococcus erythropolis PR4, complete genome

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
30948573095564708hypothetical protein
30956363096070435hypothetical protein
309606730972331167hypothetical protein
30972303097820591site-specific recombinaseQuickGO ontologyBLASTP
30987713099082312hypothetical protein
309910731012512145hypothetical proteinBLASTP
310126631037612496hypothetical proteinBLASTP
310375431072543501hypothetical proteinBLASTP
310725431107603507hypothetical proteinBLASTP
31107653111364600hypothetical proteinBLASTP
31113613111990630hypothetical proteinBLASTP
31120583112291234hypothetical proteinBLASTP
311271831138811164integraseQuickGO ontologyBLASTP
31139143114123210hypothetical protein
31141583114694537hypothetical proteinBLASTP
311482831168852058threonyl-tRNA synthetaseQuickGO ontologyBLASTP
31168823117436555HIT family proteinQuickGO ontologyBLASTP
31175183118213696phosphatidylinositol synthaseQuickGO ontologyBLASTP
31182103119112903acyltransferaseQuickGO ontologyBLASTP
311910931202361128mannosyltransferase PimAQuickGO ontologyBLASTP
312023331212551023hypothetical proteinBLASTP