Pre_GI Gene

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Host: NC_002947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002947:2809591 Pseudomonas putida KT2440, complete genome

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
280959128115131923threonyl-tRNA synthetaseQuickGO ontologyBLASTP
28115312812064534translation initiation factor IF-3QuickGO ontologyBLASTP
2812110281231921050S ribosomal protein L35QuickGO ontologyBLASTP
2812347281270335750S ribosomal protein L20QuickGO ontologyBLASTP
281281328138291017phenylalanyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
281386128162422382phenylalanyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
28162472816549303integration host factor alpha subunitQuickGO ontologyBLASTP
28165302816886357hypothetical proteinBLASTP
2817001281707474tRNA-ProQuickGO ontologyBLASTP
281918928201961008hypothetical proteinBLASTP
28207082821328621glutathione S-transferase family proteinQuickGO ontologyBLASTP
28217192822312594transcriptional regulator TetR familyQuickGO ontologyBLASTP
282242528234591035alcohol dehydrogenase zinc-containingQuickGO ontologyBLASTP
28239222824383462isoquinoline 1-oxidoreductase alpha subunit putativeQuickGO ontologyBLASTP
282438528265772193isoquinoline 1-oxidoreductase beta subunit putativeQuickGO ontologyBLASTP
282658528278081224cytochrome c family proteinQuickGO ontologyBLASTP
282782228290301209xanthine dehydrogenase accessory factor putativeQuickGO ontologyBLASTP
28290592829397339hypothetical proteinBLASTP
28293942830362969molybdenum cofactor biosynthesis protein A putativeQuickGO ontologyBLASTP
28303402830939600hypothetical proteinBLASTP
28312222831527306transcriptional regulator ArsR familyQuickGO ontologyBLASTP
28316662832649984hypothetical proteinBLASTP