Pre_GI Gene

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Host: NC_002516 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_002516:3079850 Pseudomonas aeruginosa PAO1, complete genome

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
307985030834823633hypothetical proteinBLASTP
308348530861452661hypothetical proteinBLASTP
308614230874911350hypothetical proteinBLASTP
30886603089613954hypothetical proteinBLASTP
30896443090108465hypothetical proteinBLASTP
309022130936613441hypothetical proteinBLASTP
30936583094185528hypothetical proteinBLASTP
309475730960521296hypothetical proteinBLASTP
309613030985082379probable restriction-modification system proteinQuickGO ontologyBLASTP
30986263098979354hypothetical proteinBLASTP
30994733099730258hypothetical proteinBLASTP
30998103100112303integration host factor subunit alphaQuickGO ontologyBLASTP
310011631024942379phenylalanyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
310252931035451017phenylalanyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
3103643310399935750S ribosomal protein L20QuickGO ontologyBLASTP
3104023310421719550S ribosomal protein L35QuickGO ontologyBLASTP
31042793104830552translation initiation factor IF-3QuickGO ontologyBLASTP
310483031067521923threonyl-tRNA synthetaseQuickGO ontologyBLASTP