Pre_GI Gene

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Host: NC_009434 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009434:2577717 Pseudomonas stutzeri A1501, complete genome

Host Lineage: Pseudomonas stutzeri; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain (A1501; CGMCC 0351) was isolated from rice roots that had been inoculated with strain A15 in a rice paddy in China. It is considered wild-type and has been studied for the nitrogen-fixation process and is used as an inoculant during rice cultivation. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas stutzeri is a nonfluorescent denitrifying bacterium widely distributed in the environment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
257771725806112895chaperone-associated ATPase putativeQuickGO ontologyBLASTP
258216525835771413signal transduction ATPaseQuickGO ontologyBLASTP
25835992584000402response regulatorQuickGO ontologyBLASTP
2584180258425677tRNA-ProQuickGO ontologyBLASTP
25843422584698357transcriptional regulator putativeQuickGO ontologyBLASTP
25846792584981303integration host factor subunit alphaQuickGO ontologyBLASTP
258498525873632379phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
258740025884161017phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
2588591258894735750S ribosomal protein L20QuickGO ontologyBLASTP
2588975258916919550S ribosomal protein L35QuickGO ontologyBLASTP
25892292589762534translation initiation factor IF-3QuickGO ontologyBLASTP
258978025917021923threonyl-tRNA synthetaseQuickGO ontologyBLASTP
259217625934591284glycineD-amino acid oxidaseQuickGO ontologyBLASTP
25934562594415960TPR repeat-containing proteinQuickGO ontologyBLASTP
25944122594813402hypothetical protein
25950182595335318hypothetical proteinBLASTP
259540625964341029hypothetical proteinBLASTP