Pre_GI Gene

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Host: NC_003198 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003198:1693623 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
169362316960102388phenylalanyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
16960261697009984phenylalanyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
1697146169719045phenylalanyl-tRNA synthetase operon leader peptideQuickGO ontology
1697311169766735750S ribosomal protein L20QuickGO ontologyBLASTP
1697718169791519850S ribosomal protein L35QuickGO ontologyBLASTP
16980111698553543translation initiation factor IF-3QuickGO ontologyBLASTP
169855717004851929threonyl-tRNA synthetaseQuickGO ontologyBLASTP
170137717026001224O-antigen polymeraseQuickGO ontologyBLASTP
17029231703129207hypothetical proteinBLASTP
17041541704468315hypothetical proteinBLASTP
17046111705570960putative outer membrane proteinQuickGO ontologyBLASTP
17056191706377759putative outer membrane proteinQuickGO ontologyBLASTP
170666617075989336-phosphofructokinase isozymeQuickGO ontologyBLASTP
17076951707985291hypothetical proteinBLASTP
17080921708952861hypothetical proteinBLASTP
17089951709531537hypothetical proteinBLASTP
17096801710348669putative hydrolaseQuickGO ontologyBLASTP
17104861711085600hypothetical proteinBLASTP
171122217126131392putative sodiumdicarboxylate symporterQuickGO ontologyBLASTP
17127161712958243cell division activator CedAQuickGO ontologyBLASTP
171317517154272253catalase HPIIQuickGO ontologyBLASTP