Pre_GI Gene

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Host: NC_003197 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003197:1401603 Salmonella typhimurium LT2, complete genome

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14016031402202600putative SOS response proteinQuickGO ontologyBLASTP
14023401403008669putative enzymeQuickGO ontologyBLASTP
14031571403693537putative regulatory proteinQuickGO ontologyBLASTP
14037361404596861putative cytoplasmic proteinQuickGO ontologyBLASTP
14047031404993291putative cytoplasmic proteinQuickGO ontologyBLASTP
140509014060229336-phosphofructokinase IIQuickGO ontologyBLASTP
14063111407069759putative outer membrane proteinQuickGO ontologyBLASTP
14071181408077960putative outer membrane proteinQuickGO ontologyBLASTP
14082201408534315putative inner membrane proteinQuickGO ontologyBLASTP
14085311409385855putative DNARNA non-specific endonucleaseQuickGO ontologyBLASTP
141008714113101224O-antigen polymeraseQuickGO ontologyBLASTP
141220214141301929threonyl-tRNA synthetaseQuickGO ontologyBLASTP
14141341414676543translation initiation factor IF-3QuickGO ontologyBLASTP
1414772141496919850S ribosomal protein L35QuickGO ontologyBLASTP
1415020141537635750S ribosomal protein L20QuickGO ontologyBLASTP
14156781416661984phenylalanyl-tRNA synthetase alpha subunitQuickGO ontologyBLASTP
141667714190642388phenylalanyl-tRNA synthetase beta subunitQuickGO ontologyBLASTP
14190691419368300integration host factor alpha subunitQuickGO ontologyBLASTP
14195711420551981vtamin B12-transporter permeaseQuickGO ontologyBLASTP
14206431421194552vitamin B12 transport proteinQuickGO ontologyBLASTP
14211941421943750vitamin B12-transporter ATPaseQuickGO ontologyBLASTP
14220201422484465lipoproteinQuickGO ontologyBLASTP
14227981423511714hypothetical proteinBLASTP
142357314250151443hypothetical proteinBLASTP
14250501425241192putative cytoplasmic proteinQuickGO ontologyBLASTP