Pre_GI Gene

Some Help

Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:2903493 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
29034932904284792GumM proteinQuickGO ontologyBLASTP
29042922905086795GumL proteinQuickGO ontologyBLASTP
290512729063291203gumK proteinQuickGO ontologyBLASTP
290639429078931500GumJ proteinQuickGO ontologyBLASTP
290789029089391050GumI proteinQuickGO ontologyBLASTP
290893629100781143GumH proteinQuickGO ontologyBLASTP
291014629112161071GumG proteinQuickGO ontologyBLASTP
291121329123071095GumF proteinQuickGO ontologyBLASTP
291230429136021299gumE proteinQuickGO ontologyBLASTP
291368529151391455GumD proteinQuickGO ontologyBLASTP
291538229167311350GumC proteinQuickGO ontologyBLASTP
29168032917444642GumB proteinQuickGO ontologyBLASTP
2917971291804777tRNA-ProQuickGO ontologyBLASTP
29181082918464357hypothetical proteinBLASTP
29184452918744300integration host factor subunit alphaQuickGO ontologyBLASTP
291876529211402376phenylalanyl-tRNA synthetase subunit betaQuickGO ontologyBLASTP
292127029222801011phenylalanyl-tRNA synthetase subunit alphaQuickGO ontologyBLASTP
2922580292293936050S ribosomal protein L20QuickGO ontologyBLASTP
2922950292314719850S ribosomal protein L35QuickGO ontologyBLASTP
29233882923867480translation initiation factor IF-3QuickGO ontologyBLASTP
292397929258891911threonyl-tRNA synthetaseQuickGO ontologyBLASTP